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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS07550 and LRK55_RS07555 are separated by 144 nucleotides
LRK55_RS07555 and LRK55_RS07560 are separated by 173 nucleotides
LRK55_RS07560 and LRK55_RS07565 are separated by 847 nucleotides
LRK55_RS07565 and LRK55_RS07570 are separated by 189 nucleotides
LRK55_RS07550: LRK55_RS07550 - efflux RND transporter permease subunit, at 1,652,533 to 1,655,703
_RS07550
LRK55_RS07555: LRK55_RS07555 - efflux RND transporter permease subunit, at 1,655,848 to 1,659,024
_RS07555
LRK55_RS07560: LRK55_RS07560 - TonB-dependent vitamin B12 receptor, at 1,659,198 to 1,661,045
_RS07560
LRK55_RS07565: LRK55_RS07565 - TonB-dependent receptor, at 1,661,893 to 1,664,907
_RS07565
LRK55_RS07570: LRK55_RS07570 - sulfotransferase, at 1,665,097 to 1,666,719
_RS07570
Group
Condition
LRK55
_RS07550
LRK55
_RS07555
LRK55
_RS07560
LRK55
_RS07565
LRK55
_RS07570
pH
R2A_PIPES pH 4.25
-0.7
-0.2
-1.2
-0.3
-0.1
pH
R2A_PIPES pH 4.25
-0.4
-0.3
-1.1
-0.4
-0.0
stress
R2A with Zinc chloride 2560 uM
-0.3
-0.2
-0.6
-0.2
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
+0.1
-0.8
-0.2
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.2
-0.6
-0.1
-0.2
pH
R2A_PIPES pH 4.5
-0.2
-0.1
-0.8
-0.1
-0.0
no stress control
no stress control
-0.3
-0.0
-0.5
-0.1
-0.2
no stress control
no stress control
-0.1
-0.1
-0.4
-0.1
-0.3
pH
R2A_PIPES pH 4.5
-0.3
-0.0
-0.6
-0.1
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.1
-0.6
-0.1
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.1
-0.3
-0.1
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
+0.1
-0.3
-0.0
-0.1
no stress control
no stress control
-0.5
-0.1
-0.2
-0.0
-0.1
no stress control
no stress control
-0.2
-0.0
-0.4
-0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
+0.1
-0.5
+0.1
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.3
-0.3
-0.0
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.1
-0.2
+0.0
-0.3
no stress control
no stress control
-0.2
-0.1
-0.4
-0.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
+0.1
-0.5
+0.0
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.2
-0.2
+0.0
-0.1
no stress control
no stress control
-0.3
+0.0
-0.2
-0.1
-0.0
no stress control
no stress control
-0.2
+0.0
-0.2
-0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.0
-0.1
+0.1
-0.0
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