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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS07535 and LRK55_RS07540 are separated by 165 nucleotides
LRK55_RS07540 and LRK55_RS07545 are separated by 87 nucleotides
LRK55_RS07545 and LRK55_RS07550 are separated by 58 nucleotides
LRK55_RS07550 and LRK55_RS07555 are separated by 144 nucleotides
LRK55_RS07535: LRK55_RS07535 - pitrilysin family protein, at 1,648,596 to 1,649,975
_RS07535
LRK55_RS07540: LRK55_RS07540 - hypothetical protein, at 1,650,141 to 1,651,097
_RS07540
LRK55_RS07545: LRK55_RS07545 - MFS transporter, at 1,651,185 to 1,652,474
_RS07545
LRK55_RS07550: LRK55_RS07550 - efflux RND transporter permease subunit, at 1,652,533 to 1,655,703
_RS07550
LRK55_RS07555: LRK55_RS07555 - efflux RND transporter permease subunit, at 1,655,848 to 1,659,024
_RS07555
Group
Condition
LRK55
_RS07535
LRK55
_RS07540
LRK55
_RS07545
LRK55
_RS07550
LRK55
_RS07555
pH
R2A_PIPES pH 4.25
+0.1
-0.7
-0.1
-0.4
-0.3
stress
R2A with Zinc chloride 2560 uM
+0.0
-0.4
-0.4
-0.3
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
-0.6
-0.2
-0.3
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.4
-0.4
-0.3
-0.1
no stress control
no stress control
-0.1
-0.2
+0.0
-0.5
-0.1
stress
R2A with Zinc chloride 2560 uM
+0.0
-0.4
-0.1
-0.2
-0.2
no stress control
no stress control
-0.1
-0.2
-0.3
-0.2
-0.1
no stress control
no stress control
-0.1
-0.3
-0.1
-0.1
-0.1
no stress control
no stress control
-0.1
-0.5
+0.3
-0.2
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
+0.0
-0.3
-0.4
+0.1
pH
R2A_PIPES pH 4.5
+0.1
-0.4
+0.1
-0.2
-0.1
no stress control
no stress control
+0.0
-0.0
-0.1
-0.3
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.4
-0.5
+0.2
-0.3
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
-0.1
-0.2
-0.3
-0.1
pH
R2A_PIPES pH 4.25
+0.3
+0.1
+0.1
-0.7
-0.2
pH
R2A_PIPES pH 4.5
+0.5
-0.2
-0.2
-0.3
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
-0.1
+0.2
-0.3
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.6
-0.0
-0.0
-0.6
+0.1
no stress control
no stress control
+0.2
-0.4
+0.5
-0.2
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.4
-0.1
+0.1
-0.1
-0.2
no stress control
no stress control
+0.3
-0.2
+0.3
-0.3
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
-0.2
+0.5
-0.2
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
+0.4
+0.6
-0.1
-0.1
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