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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS07450 and LRK55_RS07455 are separated by 93 nucleotides
LRK55_RS07455 and LRK55_RS07460 are separated by 51 nucleotides
LRK55_RS07460 and LRK55_RS07465 are separated by 43 nucleotides
LRK55_RS07465 and LRK55_RS07470 are separated by 208 nucleotides
LRK55_RS07450: LRK55_RS07450 - peptidase S10, at 1,629,711 to 1,631,312
_RS07450
LRK55_RS07455: LRK55_RS07455 - hypothetical protein, at 1,631,406 to 1,632,263
_RS07455
LRK55_RS07460: LRK55_RS07460 - MBL fold metallo-hydrolase, at 1,632,315 to 1,633,181
_RS07460
LRK55_RS07465: LRK55_RS07465 - metalloregulator ArsR/SmtB family transcription factor, at 1,633,225 to 1,633,575
_RS07465
LRK55_RS07470: LRK55_RS07470 - FAD/NAD(P)-binding oxidoreductase, at 1,633,784 to 1,635,085
_RS07470
Group
Condition
LRK55
_RS07450
LRK55
_RS07455
LRK55
_RS07460
LRK55
_RS07465
LRK55
_RS07470
pH
R2A_PIPES pH 4.25
-0.2
-0.4
-0.3
-1.7
-0.4
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.9
-0.3
-0.9
-0.4
pH
R2A_PIPES pH 4.25
+0.0
-0.7
-0.2
-1.2
-0.2
pH
R2A_PIPES pH 4.5
-0.1
-0.6
-0.1
-0.9
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.1
-0.6
-0.0
-0.8
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-0.3
-0.3
-0.5
-0.3
no stress control
no stress control
-0.2
-0.3
-0.2
-0.3
-0.4
pH
R2A_PIPES pH 4.5
-0.0
-0.3
+0.1
-0.9
-0.0
no stress control
no stress control
-0.1
-0.3
-0.3
-0.3
-0.1
no stress control
no stress control
-0.1
-0.4
-0.1
-0.2
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
-0.1
-0.3
+0.0
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.5
-0.2
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
-0.1
-0.4
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.0
-0.4
-0.1
-0.1
-0.2
no stress control
no stress control
-0.2
-0.4
+0.2
-0.4
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.3
-0.1
-0.2
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
-0.3
-0.1
-0.2
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
-0.3
+0.0
-0.6
+0.2
no stress control
no stress control
-0.2
-0.2
+0.0
-0.2
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
+0.2
+0.2
-0.5
-0.2
no stress control
no stress control
-0.0
-0.3
+0.1
-0.1
-0.0
no stress control
no stress control
-0.1
-0.1
-0.0
-0.1
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
+0.1
+0.3
-0.0
-0.2
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