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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS07385 and LRK55_RS07390 are separated by 172 nucleotides
LRK55_RS07390 and LRK55_RS07395 are separated by 111 nucleotides
LRK55_RS07395 and LRK55_RS07400 are separated by 143 nucleotides
LRK55_RS07400 and LRK55_RS07405 are separated by 309 nucleotides
LRK55_RS07385: LRK55_RS07385 - serine protease, at 1,605,649 to 1,607,646
_RS07385
LRK55_RS07390: LRK55_RS07390 - TonB-dependent receptor, at 1,607,819 to 1,610,062
_RS07390
LRK55_RS07395: LRK55_RS07395 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 1,610,174 to 1,612,405
_RS07395
LRK55_RS07400: LRK55_RS07400 - DEAD/DEAH box helicase, at 1,612,549 to 1,617,012
_RS07400
LRK55_RS07405: LRK55_RS07405 - hypothetical protein, at 1,617,322 to 1,617,498
_RS07405
Group
Condition
LRK55
_RS07385
LRK55
_RS07390
LRK55
_RS07395
LRK55
_RS07400
LRK55
_RS07405
no stress control
no stress control
-0.1
-0.1
-0.1
-0.1
-0.6
pH
R2A_PIPES pH 4.25
-0.1
-0.3
+0.1
-0.3
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.2
+0.1
+0.1
-0.7
no stress control
no stress control
-0.1
-0.2
+0.0
-0.0
-0.5
no stress control
no stress control
+0.0
-0.0
-0.2
-0.0
-0.6
stress
R2A with Zinc chloride 2560 uM
+0.1
-0.2
+0.0
-0.2
-0.4
no stress control
no stress control
+0.0
-0.1
-0.0
-0.2
-0.4
no stress control
no stress control
+0.0
-0.2
-0.0
-0.1
-0.3
no stress control
no stress control
-0.1
-0.2
-0.0
-0.1
-0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-0.1
-0.0
-0.2
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
-0.1
-0.1
+0.1
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.2
+0.1
-0.0
-0.2
no stress control
no stress control
+0.0
-0.2
+0.1
-0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.0
+0.0
-0.0
-0.5
pH
R2A_PIPES pH 4.5
+0.0
-0.0
+0.1
-0.2
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.1
-0.0
-0.1
-0.2
stress
R2A with Zinc chloride 2560 uM
+0.1
-0.2
+0.1
+0.0
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.0
-0.0
-0.1
-0.2
pH
R2A_PIPES pH 4.5
-0.1
-0.2
+0.3
-0.1
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.1
+0.0
-0.1
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
-0.0
+0.0
-0.0
-0.2
pH
R2A_PIPES pH 4.25
-0.0
-0.2
-0.1
+0.2
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.1
+0.0
-0.1
+0.1
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