Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS07035 and LRK55_RS07040 are separated by 70 nucleotidesLRK55_RS07040 and LRK55_RS07045 are separated by 52 nucleotidesLRK55_RS07045 and LRK55_RS07050 are separated by 104 nucleotidesLRK55_RS07050 and LRK55_RS07055 are separated by 167 nucleotides LRK55_RS07035: LRK55_RS07035 - hypothetical protein, at 1,520,287 to 1,520,901 _RS07035 LRK55_RS07040: LRK55_RS07040 - pteridine reductase, at 1,520,972 to 1,521,718 _RS07040 LRK55_RS07045: LRK55_RS07045 - lipid A biosynthesis acyltransferase, at 1,521,771 to 1,522,664 _RS07045 LRK55_RS07050: LRK55_RS07050 - D-aminoacyl-tRNA deacylase, at 1,522,769 to 1,523,209 _RS07050 LRK55_RS07055: LRK55_RS07055 - RNA polymerase sigma factor RpoD, at 1,523,377 to 1,525,254 _RS07055
Group Condition LRK55_RS07035 LRK55_RS07040 LRK55_RS07045 LRK55_RS07050 LRK55_RS07055
pH R2A_PIPES pH 4.25 -0.1 -3.3 N.D. -1.0 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.1 -3.5 N.D. -0.8 N.D.
pH R2A_PIPES pH 4.25 +0.1 -2.6 N.D. -1.3 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 -3.0 N.D. -0.4 N.D.
no stress control no stress control -0.1 -2.5 N.D. -0.6 N.D.
no stress control no stress control -0.1 -2.5 N.D. -0.3 N.D.
no stress control no stress control +0.0 -2.2 N.D. -0.7 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -2.7 N.D. -0.3 N.D.
no stress control no stress control -0.1 -2.3 N.D. -0.4 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 -1.9 N.D. -0.7 N.D.
stress R2A with Zinc chloride 2560 uM +0.1 -2.2 N.D. -0.4 N.D.
no stress control no stress control -0.1 -1.7 N.D. -0.7 N.D.
no stress control no stress control -0.1 -2.1 N.D. -0.4 N.D.
pH R2A_PIPES pH 4.5 +0.1 -2.1 N.D. -0.4 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 -2.2 N.D. +0.0 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 -1.4 N.D. -0.6 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.0 -1.8 N.D. -0.3 N.D.
no stress control no stress control +0.1 -1.6 N.D. -0.5 N.D.
pH R2A_PIPES pH 4.5 +0.2 -1.9 N.D. -0.3 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.2 -1.7 N.D. -0.4 N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.1 -1.4 N.D. -0.4 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.0 -1.5 N.D. +0.1 N.D.
stress R2A with Zinc chloride 2560 uM +0.1 -1.7 N.D. +0.2 N.D.
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