Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS07015 and LRK55_RS07020 overlap by 24 nucleotidesLRK55_RS07020 and LRK55_RS07025 are separated by 8 nucleotidesLRK55_RS07025 and LRK55_RS07030 are separated by 142 nucleotidesLRK55_RS07030 and LRK55_RS07035 are separated by 184 nucleotides LRK55_RS07015: LRK55_RS07015 - LTA synthase family protein, at 1,513,974 to 1,516,184 _RS07015 LRK55_RS07020: LRK55_RS07020 - VanZ family protein, at 1,516,161 to 1,516,571 _RS07020 LRK55_RS07025: LRK55_RS07025 - SAM-dependent methyltransferase, at 1,516,580 to 1,517,773 _RS07025 LRK55_RS07030: LRK55_RS07030 - TonB-dependent receptor, at 1,517,916 to 1,520,102 _RS07030 LRK55_RS07035: LRK55_RS07035 - hypothetical protein, at 1,520,287 to 1,520,901 _RS07035
Group Condition LRK55_RS07015 LRK55_RS07020 LRK55_RS07025 LRK55_RS07030 LRK55_RS07035
pH R2A_PIPES pH 4.25 -0.9 N.D. N.D. -4.6 -0.1
pH R2A_PIPES pH 4.25 -1.0 N.D. N.D. -4.4 +0.1
pH R2A_PIPES pH 4.5 -1.7 N.D. N.D. -3.2 +0.1
pH R2A_PIPES pH 4.5 -1.4 N.D. N.D. -3.5 +0.2
stress R2A with Zinc chloride 2560 uM -2.8 N.D. N.D. -0.6 +0.1
stress R2A with Zinc chloride 2560 uM -2.3 N.D. N.D. -0.6 +0.1
stress R2A_PIPES with Cadmium chloride 64 uM -1.4 N.D. N.D. -0.4 -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -1.3 N.D. N.D. -0.1 -0.2
stress R2A_PIPES with Cadmium chloride 64 uM -1.0 N.D. N.D. -0.5 -0.0
stress R2A_PIPES with Aluminum chloride 0.140625 mM -1.4 N.D. N.D. -0.0 -0.1
no stress control no stress control -1.3 N.D. N.D. -0.0 -0.1
no stress control no stress control -1.4 N.D. N.D. -0.0 +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -1.1 N.D. N.D. -0.2 -0.0
no stress control no stress control -1.1 N.D. N.D. -0.1 -0.1
stress R2A with Nickel (II) chloride 1696 uM -1.3 N.D. N.D. -0.0 +0.0
no stress control no stress control -1.1 N.D. N.D. -0.1 -0.1
no stress control no stress control -1.0 N.D. N.D. -0.1 -0.1
no stress control no stress control -1.1 N.D. N.D. -0.0 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.8 N.D. N.D. -0.1 -0.2
stress R2A with Nickel (II) chloride 1696 uM -1.0 N.D. N.D. +0.0 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -1.0 N.D. N.D. -0.1 +0.2
no stress control no stress control -0.9 N.D. N.D. -0.1 +0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.9 N.D. N.D. -0.0 +0.2
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