Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS06755 and LRK55_RS06760 overlap by 4 nucleotidesLRK55_RS06760 and LRK55_RS06765 are separated by 94 nucleotidesLRK55_RS06765 and LRK55_RS06770 are separated by 114 nucleotidesLRK55_RS06770 and LRK55_RS06775 are separated by 67 nucleotides LRK55_RS06755: LRK55_RS06755 - ABC transporter ATP-binding protein, at 1,456,501 to 1,457,466 _RS06755 LRK55_RS06760: LRK55_RS06760 - ABC transporter permease, at 1,457,463 to 1,458,245 _RS06760 LRK55_RS06765: LRK55_RS06765 - pseudouridine synthase, at 1,458,340 to 1,459,059 _RS06765 LRK55_RS06770: LRK55_RS06770 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,459,174 to 1,460,223 _RS06770 LRK55_RS06775: LRK55_RS06775 - 30S ribosomal protein S21, at 1,460,291 to 1,460,506 _RS06775
Group Condition LRK55_RS06755 LRK55_RS06760 LRK55_RS06765 LRK55_RS06770 LRK55_RS06775
stress R2A with Nickel (II) chloride 1696 uM -3.1 -2.5 +0.3 N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM -2.3 -1.7 +0.2 N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.7 +0.5 +0.0 N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.7 +0.5 +0.1 N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.6 +0.5 +0.3 N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.6 +0.7 +0.2 N.D. N.D.
no stress control no stress control +0.8 +0.7 -0.0 N.D. N.D.
no stress control no stress control +0.7 +0.8 +0.2 N.D. N.D.
no stress control no stress control +0.7 +0.8 +0.2 N.D. N.D.
no stress control no stress control +0.7 +0.7 +0.4 N.D. N.D.
no stress control no stress control +0.8 +0.7 +0.3 N.D. N.D.
stress R2A with Zinc chloride 2560 uM +0.7 +0.8 +0.4 N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.8 +0.8 +0.2 N.D. N.D.
no stress control no stress control +0.8 +0.8 +0.3 N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.9 +0.9 +0.2 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +1.0 +1.1 +0.0 N.D. N.D.
no stress control no stress control +0.8 +0.9 +0.4 N.D. N.D.
stress R2A with Zinc chloride 2560 uM +1.1 +0.8 +0.3 N.D. N.D.
pH R2A_PIPES pH 4.5 +1.2 +1.1 +0.3 N.D. N.D.
pH R2A_PIPES pH 4.5 +1.2 +1.1 +0.4 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +1.2 +1.3 +0.4 N.D. N.D.
pH R2A_PIPES pH 4.25 +2.5 +2.5 +0.4 N.D. N.D.
pH R2A_PIPES pH 4.25 +2.4 +2.6 +0.3 N.D. N.D.
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