Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS06560 and LRK55_RS06565 are separated by 162 nucleotidesLRK55_RS06565 and LRK55_RS06570 are separated by 67 nucleotidesLRK55_RS06570 and LRK55_RS06575 are separated by 150 nucleotidesLRK55_RS06575 and LRK55_RS06580 are separated by 27 nucleotides LRK55_RS06560: LRK55_RS06560 - zinc-ribbon and DUF3426 domain-containing protein, at 1,418,377 to 1,419,234 _RS06560 LRK55_RS06565: LRK55_RS06565 - helix-turn-helix domain-containing protein, at 1,419,397 to 1,419,714 _RS06565 LRK55_RS06570: LRK55_RS06570 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 1,419,782 to 1,421,392 _RS06570 LRK55_RS06575: LRK55_RS06575 - glutathione S-transferase, at 1,421,543 to 1,422,253 _RS06575 LRK55_RS06580: LRK55_RS06580 - DUF2782 domain-containing protein, at 1,422,281 to 1,422,817 _RS06580
Group Condition LRK55_RS06560 LRK55_RS06565 LRK55_RS06570 LRK55_RS06575 LRK55_RS06580
pH R2A_PIPES pH 4.25 -0.1 N.D. -3.2 +0.1 -4.5
pH R2A_PIPES pH 4.25 +0.9 N.D. -3.2 -0.3 -4.1
pH R2A_PIPES pH 4.5 -0.8 N.D. -3.8 -0.0 -1.7
pH R2A_PIPES pH 4.5 -0.2 N.D. -3.9 -0.2 -1.6
stress R2A with Zinc chloride 2560 uM -0.2 N.D. -3.9 -0.2 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 N.D. -2.9 -0.1 -1.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.6 N.D. -2.8 -0.1 -0.4
no stress control no stress control -0.6 N.D. -2.9 -0.1 -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.4 N.D. -3.0 +0.0 -0.4
no stress control no stress control -0.0 N.D. -3.4 -0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 N.D. -2.6 -0.0 -0.9
no stress control no stress control -0.3 N.D. -2.7 -0.2 -0.3
no stress control no stress control +0.4 N.D. -3.8 +0.2 -0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.3 N.D. -3.3 -0.1 -0.2
no stress control no stress control -0.5 N.D. -2.4 -0.2 -0.3
stress R2A with Zinc chloride 2560 uM +0.8 N.D. -3.7 -0.4 -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.1 N.D. -3.0 -0.1 -0.1
no stress control no stress control -0.1 N.D. -2.8 -0.1 -0.2
stress R2A with Nickel (II) chloride 1696 uM +0.3 N.D. -3.3 +0.2 -0.1
no stress control no stress control +0.2 N.D. -3.1 +0.1 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM +0.0 N.D. -2.9 +0.2 -0.2
stress R2A with Nickel (II) chloride 1696 uM +0.2 N.D. -2.5 -0.0 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM -0.4 N.D. -1.4 -0.1 -0.3
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