Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS06515 and LRK55_RS06520 are separated by 218 nucleotidesLRK55_RS06520 and LRK55_RS06525 are separated by 61 nucleotidesLRK55_RS06525 and LRK55_RS06530 are separated by 70 nucleotidesLRK55_RS06530 and LRK55_RS06535 overlap by 1 nucleotides LRK55_RS06515: LRK55_RS06515 - co-chaperone GroES, at 1,410,169 to 1,410,462 _RS06515 LRK55_RS06520: LRK55_RS06520 - divalent-cation tolerance protein CutA, at 1,410,681 to 1,411,034 _RS06520 LRK55_RS06525: LRK55_RS06525 - DMT family transporter, at 1,411,096 to 1,411,992 _RS06525 LRK55_RS06530: LRK55_RS06530 - protein-disulfide reductase DsbD, at 1,412,063 to 1,414,252 _RS06530 LRK55_RS06535: LRK55_RS06535 - TlpA disulfide reductase family protein, at 1,414,252 to 1,414,788 _RS06535
Group Condition LRK55_RS06515 LRK55_RS06520 LRK55_RS06525 LRK55_RS06530 LRK55_RS06535
pH R2A_PIPES pH 4.25 N.D. -0.6 +0.1 -3.1 -1.0
stress R2A with Zinc chloride 2560 uM N.D. -0.6 +0.1 -3.2 -0.9
pH R2A_PIPES pH 4.5 N.D. -0.1 +0.1 -3.4 -0.7
pH R2A_PIPES pH 4.5 N.D. -0.1 +0.0 -3.2 -0.8
pH R2A_PIPES pH 4.25 N.D. -0.2 +0.2 -3.1 -0.9
stress R2A with Zinc chloride 2560 uM N.D. -0.1 +0.0 -2.9 -0.9
no stress control no stress control N.D. +0.1 +0.1 -3.5 -0.3
no stress control no stress control N.D. +0.1 +0.2 -3.6 -0.2
no stress control no stress control N.D. +0.1 +0.0 -3.0 -0.3
no stress control no stress control N.D. +0.1 -0.0 -2.8 -0.1
no stress control no stress control N.D. +0.2 +0.0 -2.5 -0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. +0.2 -0.1 -2.4 -0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. +0.3 -0.2 -2.5 -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.1 +0.2 -2.9 +0.0
no stress control no stress control N.D. +0.2 +0.1 -2.7 -0.0
no stress control no stress control N.D. -0.1 +0.1 -2.3 -0.3
stress R2A with Nickel (II) chloride 1696 uM N.D. +0.1 +0.0 -1.8 -0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +0.2 +0.3 -2.4 -0.3
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.1 +0.1 -1.4 -0.8
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.2 +0.0 -2.1 -0.2
stress R2A with Nickel (II) chloride 1696 uM N.D. +0.2 +0.3 -2.1 -0.5
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.1 +0.1 -1.3 -0.6
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +0.3 -0.1 -1.5 -0.4
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