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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS06365 and LRK55_RS06370 overlap by 11 nucleotides
LRK55_RS06370 and LRK55_RS06375 are separated by 86 nucleotides
LRK55_RS06375 and LRK55_RS06380 are separated by 193 nucleotides
LRK55_RS06380 and LRK55_RS06385 are separated by 162 nucleotides
LRK55_RS06365: LRK55_RS06365 - 6-phosphofructokinase, at 1,375,106 to 1,376,383
_RS06365
LRK55_RS06370: LRK55_RS06370 - NAD(P)H-dependent oxidoreductase, at 1,376,373 to 1,377,077
_RS06370
LRK55_RS06375: LRK55_RS06375 - transcriptional regulator GcvA, at 1,377,164 to 1,378,066
_RS06375
LRK55_RS06380: LRK55_RS06380 - RcnB family protein, at 1,378,260 to 1,378,676
_RS06380
LRK55_RS06385: LRK55_RS06385 - sodium-translocating pyrophosphatase, at 1,378,839 to 1,380,911
_RS06385
Group
Condition
LRK55
_RS06365
LRK55
_RS06370
LRK55
_RS06375
LRK55
_RS06380
LRK55
_RS06385
pH
R2A_PIPES pH 4.25
-0.6
-0.1
-0.2
+0.3
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.0
+0.0
-0.1
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
-0.1
+0.0
+0.1
+0.0
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.0
-0.1
-0.0
+0.2
no stress control
no stress control
-0.3
+0.1
+0.0
-0.1
+0.2
no stress control
no stress control
-0.2
+0.1
+0.0
-0.0
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
-0.0
-0.1
+0.2
+0.0
no stress control
no stress control
-0.3
+0.1
+0.1
-0.0
+0.2
no stress control
no stress control
-0.2
+0.0
+0.2
+0.1
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.1
+0.1
+0.2
+0.0
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.1
+0.0
+0.1
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.1
-0.0
+0.2
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
+0.3
+0.1
-0.1
+0.3
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
+0.2
+0.2
+0.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
+0.0
+0.3
+0.1
+0.0
pH
R2A_PIPES pH 4.25
-0.7
+0.2
+0.0
+0.6
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.1
+0.1
+0.3
+0.1
pH
R2A_PIPES pH 4.5
-0.1
-0.1
+0.1
+0.4
+0.0
pH
R2A_PIPES pH 4.5
-0.0
+0.1
-0.0
+0.3
+0.1
no stress control
no stress control
-0.1
+0.1
+0.2
+0.0
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
+0.5
+0.1
+0.2
-0.0
no stress control
no stress control
-0.1
+0.2
+0.2
+0.3
+0.2
no stress control
no stress control
-0.0
+0.2
+0.3
+0.2
+0.2
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