Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS06355 and LRK55_RS06360 are separated by 36 nucleotidesLRK55_RS06360 and LRK55_RS06365 are separated by 189 nucleotidesLRK55_RS06365 and LRK55_RS06370 overlap by 11 nucleotidesLRK55_RS06370 and LRK55_RS06375 are separated by 86 nucleotides LRK55_RS06355: LRK55_RS06355 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 1,372,823 to 1,374,295 _RS06355 LRK55_RS06360: LRK55_RS06360 - adenylate kinase, at 1,374,332 to 1,374,916 _RS06360 LRK55_RS06365: LRK55_RS06365 - 6-phosphofructokinase, at 1,375,106 to 1,376,383 _RS06365 LRK55_RS06370: LRK55_RS06370 - NAD(P)H-dependent oxidoreductase, at 1,376,373 to 1,377,077 _RS06370 LRK55_RS06375: LRK55_RS06375 - transcriptional regulator GcvA, at 1,377,164 to 1,378,066 _RS06375
Group Condition LRK55_RS06355 LRK55_RS06360 LRK55_RS06365 LRK55_RS06370 LRK55_RS06375
pH R2A_PIPES pH 4.25 -1.5 N.D. -0.6 -0.1 -0.2
pH R2A_PIPES pH 4.25 -1.5 N.D. -0.7 +0.2 +0.0
stress R2A with Zinc chloride 2560 uM -0.7 N.D. -0.2 +0.0 -0.1
pH R2A_PIPES pH 4.5 -0.9 N.D. -0.1 -0.1 +0.1
stress R2A with Nickel (II) chloride 1696 uM -0.6 N.D. -0.0 -0.0 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM -0.5 N.D. -0.2 -0.1 +0.0
pH R2A_PIPES pH 4.5 -0.7 N.D. -0.0 +0.1 -0.0
stress R2A with Zinc chloride 2560 uM -0.6 N.D. -0.2 +0.1 +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 N.D. -0.4 -0.0 +0.0
no stress control no stress control -0.4 N.D. -0.3 +0.1 +0.0
stress R2A_PIPES with Cadmium chloride 64 uM -0.6 N.D. -0.3 +0.3 +0.1
no stress control no stress control -0.3 N.D. -0.2 +0.1 +0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 N.D. -0.2 +0.1 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.4 N.D. -0.3 +0.0 +0.3
no stress control no stress control -0.2 N.D. -0.3 +0.1 +0.1
no stress control no stress control -0.3 N.D. -0.2 +0.0 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 N.D. -0.2 +0.1 -0.0
stress R2A with Nickel (II) chloride 1696 uM -0.4 N.D. -0.2 +0.2 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 N.D. -0.2 +0.1 +0.1
no stress control no stress control -0.4 N.D. -0.1 +0.1 +0.2
no stress control no stress control -0.2 N.D. -0.1 +0.2 +0.2
no stress control no stress control -0.2 N.D. -0.0 +0.2 +0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 N.D. -0.1 +0.5 +0.1
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