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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS06025 and LRK55_RS06030 are separated by 123 nucleotides
LRK55_RS06030 and LRK55_RS06035 are separated by 143 nucleotides
LRK55_RS06035 and LRK55_RS06040 are separated by 279 nucleotides
LRK55_RS06040 and LRK55_RS06045 are separated by 391 nucleotides
LRK55_RS06025: LRK55_RS06025 - alpha/beta fold hydrolase, at 1,296,791 to 1,297,498
_RS06025
LRK55_RS06030: LRK55_RS06030 - hypothetical protein, at 1,297,622 to 1,297,843
_RS06030
LRK55_RS06035: LRK55_RS06035 - Hsp20/alpha crystallin family protein, at 1,297,987 to 1,298,439
_RS06035
LRK55_RS06040: LRK55_RS06040 - TerC family protein, at 1,298,719 to 1,299,483
_RS06040
LRK55_RS06045: LRK55_RS06045 - GNAT family N-acetyltransferase, at 1,299,875 to 1,300,396
_RS06045
Group
Condition
LRK55
_RS06025
LRK55
_RS06030
LRK55
_RS06035
LRK55
_RS06040
LRK55
_RS06045
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.7
+0.1
-0.1
-0.0
-0.0
pH
R2A_PIPES pH 4.5
-0.2
-0.2
-0.0
-0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.5
+0.2
-0.2
-0.1
+0.2
no stress control
no stress control
-0.5
+0.1
+0.1
+0.1
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
+0.2
-0.0
-0.1
+0.3
no stress control
no stress control
-0.3
+0.3
-0.1
-0.0
+0.1
no stress control
no stress control
-0.5
+0.3
+0.0
+0.1
+0.1
no stress control
no stress control
-0.4
+0.4
+0.1
+0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
+0.2
-0.0
+0.4
-0.2
no stress control
no stress control
+0.1
+0.2
-0.0
-0.1
+0.1
pH
R2A_PIPES pH 4.25
-0.8
-0.1
+0.6
+0.1
+0.6
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.5
+0.4
+0.4
+0.2
+0.1
stress
R2A with Zinc chloride 2560 uM
+0.3
+0.2
+0.1
-0.0
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.7
+0.0
-0.0
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
+0.1
+0.5
+0.0
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.2
+0.2
-0.0
+0.2
pH
R2A_PIPES pH 4.5
+0.4
-0.1
+0.3
+0.1
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
+0.1
+0.2
+0.2
+0.1
no stress control
no stress control
+0.2
+0.2
+0.1
+0.1
+0.2
no stress control
no stress control
+0.1
+0.4
+0.1
+0.2
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.3
+0.3
-0.1
+0.4
stress
R2A with Zinc chloride 2560 uM
+0.5
+0.3
+0.3
+0.0
+0.2
pH
R2A_PIPES pH 4.25
+1.1
+0.0
-0.6
+0.4
+0.4
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