Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS05980 and LRK55_RS05985 are separated by 40 nucleotidesLRK55_RS05985 and LRK55_RS05990 are separated by 192 nucleotidesLRK55_RS05990 and LRK55_RS05995 are separated by 106 nucleotidesLRK55_RS05995 and LRK55_RS06000 are separated by 52 nucleotides LRK55_RS05980: LRK55_RS05980 - murein L,D-transpeptidase catalytic domain family protein, at 1,287,710 to 1,288,378 _RS05980 LRK55_RS05985: LRK55_RS05985 - hypothetical protein, at 1,288,419 to 1,288,799 _RS05985 LRK55_RS05990: LRK55_RS05990 - trehalase family glycosidase, at 1,288,992 to 1,290,638 _RS05990 LRK55_RS05995: LRK55_RS05995 - endonuclease/exonuclease/phosphatase family protein, at 1,290,745 to 1,291,596 _RS05995 LRK55_RS06000: LRK55_RS06000 - YbaN family protein, at 1,291,649 to 1,292,017 _RS06000
Group Condition LRK55_RS05980 LRK55_RS05985 LRK55_RS05990 LRK55_RS05995 LRK55_RS06000
pH R2A_PIPES pH 4.25 +0.2 -2.3 +0.1 +0.0 N.D.
no stress control no stress control +0.4 -0.4 -0.1 -0.1 N.D.
pH R2A_PIPES pH 4.5 +0.5 -0.9 -0.0 +0.2 N.D.
stress R2A with Zinc chloride 2560 uM +0.2 -0.4 +0.0 -0.0 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.4 -0.6 +0.1 +0.0 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.7 -0.7 +0.0 -0.2 N.D.
pH R2A_PIPES pH 4.5 +0.5 -0.7 +0.0 +0.2 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.3 -0.2 +0.0 -0.1 N.D.
pH R2A_PIPES pH 4.25 +0.7 -0.7 +0.2 -0.0 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.7 -0.4 +0.1 -0.1 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.5 -0.2 +0.0 +0.0 N.D.
no stress control no stress control +0.3 +0.1 -0.1 +0.0 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.2 +0.3 -0.1 -0.1 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.2 +0.3 +0.1 -0.0 N.D.
stress R2A with Zinc chloride 2560 uM +0.3 +0.3 +0.0 +0.0 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.3 +0.5 -0.1 -0.1 N.D.
no stress control no stress control +0.3 +0.0 +0.1 +0.2 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.5 +0.2 +0.1 +0.0 N.D.
no stress control no stress control +0.3 +0.6 +0.0 +0.0 N.D.
no stress control no stress control +0.1 +1.2 -0.0 -0.1 N.D.
no stress control no stress control +0.0 +1.0 +0.1 -0.0 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.3 +1.1 +0.0 +0.3 N.D.
no stress control no stress control +0.2 +1.2 +0.1 +0.3 N.D.
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LRK55_RS06000
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