Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS05955 and LRK55_RS05960 are separated by 2 nucleotidesLRK55_RS05960 and LRK55_RS05965 are separated by 46 nucleotidesLRK55_RS05965 and LRK55_RS05970 overlap by 6 nucleotidesLRK55_RS05970 and LRK55_RS05975 are separated by 232 nucleotides LRK55_RS05955: LRK55_RS05955 - hypothetical protein, at 1,283,870 to 1,284,391 _RS05955 LRK55_RS05960: LRK55_RS05960 - YciI family protein, at 1,284,394 to 1,284,768 _RS05960 LRK55_RS05965: LRK55_RS05965 - tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO, at 1,284,815 to 1,285,378 _RS05965 LRK55_RS05970: LRK55_RS05970 - hypothetical protein, at 1,285,373 to 1,285,618 _RS05970 LRK55_RS05975: LRK55_RS05975 - L,D-transpeptidase family protein, at 1,285,851 to 1,287,494 _RS05975
Group Condition LRK55_RS05955 LRK55_RS05960 LRK55_RS05965 LRK55_RS05970 LRK55_RS05975
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.3 -0.7 +0.2 -0.6 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 +0.2 -0.3 -0.9 -0.1
no stress control no stress control -0.0 -0.3 +0.2 -0.7 -0.0
no stress control no stress control -0.3 -0.0 -0.0 -0.1 -0.3
stress R2A with Nickel (II) chloride 1696 uM +0.0 +0.2 +0.5 -1.7 +0.2
no stress control no stress control -0.4 +0.2 -0.2 -0.2 -0.1
no stress control no stress control +0.6 -0.0 -0.3 -0.6 -0.3
no stress control no stress control -0.4 +0.2 -0.1 -0.2 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.5 +0.4 +0.0 -0.0 -0.1
no stress control no stress control -0.6 +0.2 +0.2 -0.0 -0.1
pH R2A_PIPES pH 4.25 -0.8 -0.2 +1.1 -0.5 +0.3
stress R2A with Zinc chloride 2560 uM +0.3 +0.4 -0.2 -0.7 +0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 +0.2 +0.5 -0.9 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.4 +0.6 -0.5 -0.4 +0.0
pH R2A_PIPES pH 4.25 +0.3 -0.2 +1.0 -0.9 +0.1
stress R2A_PIPES with Cadmium chloride 64 uM +0.4 +0.1 -0.3 +0.2 +0.0
pH R2A_PIPES pH 4.5 +0.2 -0.0 +0.3 -0.2 +0.1
stress R2A with Zinc chloride 2560 uM +0.2 -0.5 +0.5 +0.2 +0.2
no stress control no stress control +0.3 +0.6 +0.4 -0.5 +0.0
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 +0.4 +0.4 +0.7 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.9 +0.6 +0.3 -0.5 +0.1
stress R2A with Nickel (II) chloride 1696 uM +0.3 +0.2 +0.4 +0.3 +0.2
pH R2A_PIPES pH 4.5 +0.5 -0.1 +0.5 +0.6 +0.1
remove
LRK55_RS05955
plot
remove
LRK55_RS05960
plot
remove
LRK55_RS05965
remove
LRK55_RS05970
plot
remove
LRK55_RS05975
plot