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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS05905 and LRK55_RS05910 are separated by 18 nucleotides
LRK55_RS05910 and LRK55_RS05915 are separated by 11 nucleotides
LRK55_RS05915 and LRK55_RS05920 are separated by 4 nucleotides
LRK55_RS05920 and LRK55_RS05925 are separated by 56 nucleotides
LRK55_RS05905: LRK55_RS05905 - FAD/NAD(P)-binding protein, at 1,276,025 to 1,277,392
_RS05905
LRK55_RS05910: LRK55_RS05910 - cardiolipin synthase, at 1,277,411 to 1,278,805
_RS05910
LRK55_RS05915: LRK55_RS05915 - prolyl oligopeptidase family serine peptidase, at 1,278,817 to 1,279,599
_RS05915
LRK55_RS05920: LRK55_RS05920 - hypothetical protein, at 1,279,604 to 1,280,038
_RS05920
LRK55_RS05925: LRK55_RS05925 - bifunctional nicotinamidase/pyrazinamidase, at 1,280,095 to 1,280,748
_RS05925
Group
Condition
LRK55
_RS05905
LRK55
_RS05910
LRK55
_RS05915
LRK55
_RS05920
LRK55
_RS05925
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
-0.3
+0.2
-0.4
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.2
-0.2
-0.0
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.1
-0.2
+0.5
+0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.1
-0.2
-0.1
+0.0
no stress control
no stress control
-0.1
-0.1
+0.1
-0.2
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.0
-0.1
+0.1
+0.0
pH
R2A_PIPES pH 4.25
-0.2
-0.3
-0.2
+0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
+0.0
+0.2
+0.1
-0.2
-0.3
no stress control
no stress control
-0.6
+0.0
+0.2
+0.0
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.2
-0.0
-0.1
-0.1
no stress control
no stress control
-0.2
+0.1
+0.0
-0.0
+0.0
no stress control
no stress control
-0.2
+0.1
+0.0
-0.2
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
+0.0
-0.1
-0.3
+0.1
no stress control
no stress control
-0.2
-0.0
+0.1
-0.0
+0.2
no stress control
no stress control
-0.0
+0.2
+0.0
-0.1
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
-0.0
+0.2
+0.0
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.6
+0.1
+0.4
+0.0
+0.2
no stress control
no stress control
-0.1
+0.1
-0.2
+0.0
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.1
+0.1
+0.0
+0.4
pH
R2A_PIPES pH 4.5
+0.2
+0.1
+0.3
-0.0
+0.1
pH
R2A_PIPES pH 4.5
+0.1
+0.0
+0.3
+0.0
+0.1
stress
R2A with Zinc chloride 2560 uM
+0.6
+0.0
+0.2
-0.2
+0.2
pH
R2A_PIPES pH 4.25
+0.7
+0.1
+0.1
+0.1
+0.3
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