Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS05575 and LRK55_RS05580 are separated by 177 nucleotidesLRK55_RS05580 and LRK55_RS05585 are separated by 98 nucleotidesLRK55_RS05585 and LRK55_RS05590 are separated by 35 nucleotidesLRK55_RS05590 and LRK55_RS05595 are separated by 100 nucleotides LRK55_RS05575: LRK55_RS05575 - formylglycine-generating enzyme family protein, at 1,208,184 to 1,208,948 _RS05575 LRK55_RS05580: LRK55_RS05580 - NnrS family protein, at 1,209,126 to 1,210,376 _RS05580 LRK55_RS05585: LRK55_RS05585 - helix-turn-helix domain-containing protein, at 1,210,475 to 1,211,236 _RS05585 LRK55_RS05590: LRK55_RS05590 - oxygen-independent coproporphyrinogen III oxidase, at 1,211,272 to 1,212,672 _RS05590 LRK55_RS05595: LRK55_RS05595 - fumarylacetoacetate hydrolase family protein, at 1,212,773 to 1,213,759 _RS05595
Group Condition LRK55_RS05575 LRK55_RS05580 LRK55_RS05585 LRK55_RS05590 LRK55_RS05595
no stress control no stress control +0.0 -0.1 -0.2 -0.0 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 +0.0 -0.2 -0.1 N.D.
pH R2A_PIPES pH 4.5 +0.0 +0.1 -0.1 +0.0 N.D.
no stress control no stress control -0.1 +0.2 -0.0 -0.0 N.D.
no stress control no stress control +0.0 -0.2 +0.1 +0.0 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 +0.1 -0.1 +0.0 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 -0.0 -0.0 -0.0 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.3 -0.3 +0.1 +0.0 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.1 +0.2 -0.2 +0.1 N.D.
no stress control no stress control +0.0 +0.1 +0.0 -0.0 N.D.
no stress control no stress control +0.1 -0.1 +0.3 -0.0 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 +0.2 +0.1 -0.1 N.D.
no stress control no stress control +0.2 +0.2 -0.2 +0.2 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.1 +0.1 +0.3 -0.1 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 -0.0 +0.1 +0.0 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 -0.1 +0.4 -0.0 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -0.0 +0.2 +0.1 N.D.
pH R2A_PIPES pH 4.5 +0.1 +0.2 +0.2 -0.0 N.D.
stress R2A with Zinc chloride 2560 uM +0.2 +0.1 +0.1 +0.2 N.D.
no stress control no stress control +0.2 -0.0 +0.4 +0.0 N.D.
stress R2A with Zinc chloride 2560 uM +0.2 +0.1 +0.3 +0.1 N.D.
pH R2A_PIPES pH 4.25 +0.1 +0.4 +0.1 +0.2 N.D.
pH R2A_PIPES pH 4.25 +0.4 +0.5 -0.0 +0.1 N.D.
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