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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS05530 and LRK55_RS05535 are separated by 75 nucleotides
LRK55_RS05535 and LRK55_RS05540 are separated by 164 nucleotides
LRK55_RS05540 and LRK55_RS05545 are separated by 156 nucleotides
LRK55_RS05545 and LRK55_RS05550 are separated by 144 nucleotides
LRK55_RS05530: LRK55_RS05530 - pyruvate kinase, at 1,201,422 to 1,202,894
_RS05530
LRK55_RS05535: LRK55_RS05535 - S1/P1 nuclease, at 1,202,970 to 1,203,791
_RS05535
LRK55_RS05540: LRK55_RS05540 - type I glyceraldehyde-3-phosphate dehydrogenase, at 1,203,956 to 1,204,957
_RS05540
LRK55_RS05545: LRK55_RS05545 - ferredoxin family protein, at 1,205,114 to 1,205,437
_RS05545
LRK55_RS05550: LRK55_RS05550 - azurin, at 1,205,582 to 1,206,028
_RS05550
Group
Condition
LRK55
_RS05530
LRK55
_RS05535
LRK55
_RS05540
LRK55
_RS05545
LRK55
_RS05550
pH
R2A_PIPES pH 4.25
-2.1
-3.8
-3.4
N.D.
-1.0
pH
R2A_PIPES pH 4.25
-2.0
-3.4
-3.5
N.D.
-0.8
pH
R2A_PIPES pH 4.5
-0.9
-0.9
-3.0
N.D.
-0.7
pH
R2A_PIPES pH 4.5
-0.9
-0.9
-2.6
N.D.
-0.8
stress
R2A with Nickel (II) chloride 1696 uM
-0.9
+0.1
-3.7
N.D.
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.3
-0.1
-3.3
N.D.
+0.2
stress
R2A with Zinc chloride 2560 uM
-0.5
+0.2
-3.8
N.D.
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.4
+0.1
-3.8
N.D.
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.6
+0.1
-3.7
N.D.
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.7
-0.4
-2.1
N.D.
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.6
+0.1
-3.1
N.D.
+0.4
no stress control
no stress control
-0.3
+0.1
-2.7
N.D.
-0.1
no stress control
no stress control
-0.3
+0.1
-2.4
N.D.
-0.2
no stress control
no stress control
-0.3
-0.0
-1.8
N.D.
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.1
-1.8
N.D.
-0.3
no stress control
no stress control
-0.3
+0.1
-1.8
N.D.
-0.4
no stress control
no stress control
-0.3
+0.1
-2.1
N.D.
-0.0
no stress control
no stress control
-0.3
+0.1
-1.9
N.D.
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
+0.1
-1.7
N.D.
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
+0.1
-1.5
N.D.
-0.5
no stress control
no stress control
-0.0
+0.1
-1.8
N.D.
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.1
-2.3
N.D.
+1.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.1
-2.0
N.D.
+1.0
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