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Cofit
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS05360 and LRK55_RS05365 are separated by 57 nucleotides
LRK55_RS05365 and LRK55_RS05370 are separated by 70 nucleotides
LRK55_RS05370 and LRK55_RS05375 are separated by 61 nucleotides
LRK55_RS05375 and LRK55_RS05380 are separated by 240 nucleotides
LRK55_RS05360: LRK55_RS05360 - hypothetical protein, at 1,161,493 to 1,163,826
_RS05360
LRK55_RS05365: LRK55_RS05365 - IS3 family transposase, at 1,163,884 to 1,164,971
_RS05365
LRK55_RS05370: LRK55_RS05370 - integrase core domain-containing protein, at 1,165,042 to 1,165,170
_RS05370
LRK55_RS05375: LRK55_RS05375 - hypothetical protein, at 1,165,232 to 1,165,846
_RS05375
LRK55_RS05380: LRK55_RS05380 - NAD-dependent epimerase/dehydratase family protein, at 1,166,087 to 1,167,019
_RS05380
Group
Condition
LRK55
_RS05360
LRK55
_RS05365
LRK55
_RS05370
LRK55
_RS05375
LRK55
_RS05380
pH
R2A_PIPES pH 4.25
-3.5
-0.3
-1.1
-1.6
-4.6
pH
R2A_PIPES pH 4.25
-3.3
-0.5
-0.5
-1.7
-4.5
stress
R2A with Nickel (II) chloride 1696 uM
-3.6
-0.6
-0.6
-0.9
-4.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-3.5
-0.3
-0.9
-0.9
-4.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-3.7
-0.3
-0.4
-0.7
-5.2
pH
R2A_PIPES pH 4.5
-3.0
-0.8
-1.0
-1.3
-4.1
stress
R2A with Nickel (II) chloride 1696 uM
-3.5
-0.3
-0.8
-0.6
-5.0
stress
R2A with Zinc chloride 2560 uM
-3.4
-0.2
-1.1
-0.8
-4.6
stress
R2A with Zinc chloride 2560 uM
-3.5
-0.3
-0.2
-0.8
-5.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-3.3
-0.5
-0.6
-0.8
-3.9
stress
R2A_PIPES with Cadmium chloride 64 uM
-3.2
-0.3
-0.3
-0.5
-4.7
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-3.2
-0.4
-0.5
-0.5
-4.3
no stress control
no stress control
-2.8
-0.1
-0.6
-0.6
-4.6
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-3.1
-0.3
-0.3
-0.7
-4.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-3.1
-0.3
-0.8
-0.5
-3.9
no stress control
no stress control
-2.9
-0.5
-0.2
-0.7
-4.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-3.2
-0.2
-0.3
-0.8
-3.6
no stress control
no stress control
-2.8
-0.3
-0.2
-0.8
-4.0
pH
R2A_PIPES pH 4.5
-3.1
-0.4
-0.4
-0.6
-3.5
no stress control
no stress control
-2.8
-0.3
-0.3
-0.6
-3.9
no stress control
no stress control
-2.8
-0.3
-0.1
-0.6
-4.0
no stress control
no stress control
-2.7
-0.3
+0.1
-0.5
-3.9
no stress control
no stress control
-2.4
-0.1
-0.3
-0.4
-3.1
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