Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS05330 and LRK55_RS05335 are separated by 7 nucleotidesLRK55_RS05335 and LRK55_RS05340 are separated by 31 nucleotidesLRK55_RS05340 and LRK55_RS05345 overlap by 4 nucleotidesLRK55_RS05345 and LRK55_RS05350 overlap by 4 nucleotides LRK55_RS05330: LRK55_RS05330 - glycosyltransferase, at 1,156,501 to 1,157,517 _RS05330 LRK55_RS05335: LRK55_RS05335 - FAD-dependent oxidoreductase, at 1,157,525 to 1,158,649 _RS05335 LRK55_RS05340: LRK55_RS05340 - pyridine nucleotide transhydrogenase, at 1,158,681 to 1,159,475 _RS05340 LRK55_RS05345: LRK55_RS05345 - sugar phosphate isomerase/epimerase, at 1,159,472 to 1,160,308 _RS05345 LRK55_RS05350: LRK55_RS05350 - multidrug transporter, at 1,160,305 to 1,160,670 _RS05350
Group Condition LRK55_RS05330 LRK55_RS05335 LRK55_RS05340 LRK55_RS05345 LRK55_RS05350
pH R2A_PIPES pH 4.25 -0.4 -0.6 N.D. N.D. -4.0
pH R2A_PIPES pH 4.5 -0.2 -0.4 N.D. N.D. -4.5
pH R2A_PIPES pH 4.5 -0.5 -0.7 N.D. N.D. -3.4
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 +0.2 N.D. N.D. -4.6
pH R2A_PIPES pH 4.25 -0.2 -0.2 N.D. N.D. -3.5
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 -0.2 N.D. N.D. -3.8
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 -0.5 N.D. N.D. -3.2
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 -0.1 N.D. N.D. -3.1
stress R2A with Nickel (II) chloride 1696 uM -0.1 -0.5 N.D. N.D. -2.4
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 -0.2 N.D. N.D. -2.9
no stress control no stress control +0.0 -0.3 N.D. N.D. -2.6
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 -0.1 N.D. N.D. -2.8
no stress control no stress control -0.0 -0.2 N.D. N.D. -2.5
no stress control no stress control -0.1 -0.3 N.D. N.D. -2.2
no stress control no stress control -0.1 -0.4 N.D. N.D. -2.1
stress R2A with Zinc chloride 2560 uM +0.2 -0.2 N.D. N.D. -2.5
stress R2A with Zinc chloride 2560 uM +0.3 -0.2 N.D. N.D. -2.5
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 -0.2 N.D. N.D. -2.2
no stress control no stress control -0.0 -0.3 N.D. N.D. -1.8
no stress control no stress control -0.0 -0.3 N.D. N.D. -1.5
stress R2A with Nickel (II) chloride 1696 uM +0.1 -0.3 N.D. N.D. -1.6
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.8 +0.5 N.D. N.D. -2.9
no stress control no stress control +0.1 -0.0 N.D. N.D. -1.3
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