Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS05290 and LRK55_RS05295 are separated by 156 nucleotidesLRK55_RS05295 and LRK55_RS05300 are separated by 169 nucleotidesLRK55_RS05300 and LRK55_RS05305 are separated by 18 nucleotidesLRK55_RS05305 and LRK55_RS05310 overlap by 8 nucleotides LRK55_RS05290: LRK55_RS05290 - sulfate adenylyltransferase subunit CysD, at 1,146,785 to 1,147,702 _RS05290 LRK55_RS05295: LRK55_RS05295 - amidase, at 1,147,859 to 1,149,256 _RS05295 LRK55_RS05300: LRK55_RS05300 - electron transfer flavoprotein-ubiquinone oxidoreductase, at 1,149,426 to 1,151,036 _RS05300 LRK55_RS05305: LRK55_RS05305 - glycosyltransferase family 2 protein, at 1,151,055 to 1,151,993 _RS05305 LRK55_RS05310: LRK55_RS05310 - glycosyltransferase family 2 protein, at 1,151,986 to 1,152,972 _RS05310
Group Condition LRK55_RS05290 LRK55_RS05295 LRK55_RS05300 LRK55_RS05305 LRK55_RS05310
pH R2A_PIPES pH 4.25 N.D. -2.0 -2.6 -4.6 -4.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. -0.6 -2.9 -4.7 -4.8
pH R2A_PIPES pH 4.25 N.D. -1.9 -2.8 -4.0 -4.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. -0.2 -2.4 -4.7 -4.8
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.1 -3.1 -4.0 -4.0
stress R2A with Nickel (II) chloride 1696 uM N.D. +0.3 -3.1 -4.2 -4.0
stress R2A_PIPES with Cadmium chloride 64 uM N.D. +0.1 -3.1 -3.6 -4.2
stress R2A with Zinc chloride 2560 uM N.D. -0.1 -2.6 -4.2 -3.8
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.0 -2.3 -4.1 -4.1
stress R2A with Zinc chloride 2560 uM N.D. -0.1 -3.0 -4.0 -3.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. +0.0 -3.1 -3.9 -3.3
pH R2A_PIPES pH 4.5 N.D. +0.1 -2.6 -4.0 -3.3
pH R2A_PIPES pH 4.5 N.D. -0.0 -3.1 -3.6 -3.0
no stress control no stress control N.D. +0.4 -3.0 -3.6 -3.2
no stress control no stress control N.D. -0.0 -2.8 -3.1 -3.6
no stress control no stress control N.D. +0.1 -3.0 -3.5 -3.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. +0.1 -2.6 -3.8 -2.6
no stress control no stress control N.D. +0.0 -2.4 -3.2 -3.1
no stress control no stress control N.D. -0.1 -2.8 -2.9 -2.6
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.1 -2.4 -3.4 -2.4
no stress control no stress control N.D. +0.2 -3.5 -2.5 -2.3
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.0 -2.3 -2.7 -3.0
no stress control no stress control N.D. +0.2 -2.9 -2.7 -2.1
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