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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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5
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS05215 and LRK55_RS05220 are separated by 242 nucleotides
LRK55_RS05220 and LRK55_RS05225 are separated by 16 nucleotides
LRK55_RS05225 and LRK55_RS05230 are separated by 110 nucleotides
LRK55_RS05230 and LRK55_RS05235 are separated by 98 nucleotides
LRK55_RS05215: LRK55_RS05215 - hypothetical protein, at 1,127,314 to 1,128,222
_RS05215
LRK55_RS05220: LRK55_RS05220 - EAL domain-containing protein, at 1,128,465 to 1,131,365
_RS05220
LRK55_RS05225: LRK55_RS05225 - Hsp33 family molecular chaperone HslO, at 1,131,382 to 1,132,281
_RS05225
LRK55_RS05230: LRK55_RS05230 - monofunctional biosynthetic peptidoglycan transglycosylase, at 1,132,392 to 1,133,132
_RS05230
LRK55_RS05235: LRK55_RS05235 - CBS domain-containing protein, at 1,133,231 to 1,133,659
_RS05235
Group
Condition
LRK55
_RS05215
LRK55
_RS05220
LRK55
_RS05225
LRK55
_RS05230
LRK55
_RS05235
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.3
-0.2
-0.0
-0.4
no stress control
no stress control
N.D.
-0.0
-0.2
+0.1
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.0
-0.5
-0.2
+0.0
pH
R2A_PIPES pH 4.5
N.D.
-0.2
+0.0
-0.1
-0.3
no stress control
no stress control
N.D.
-0.1
-0.2
+0.1
-0.3
no stress control
no stress control
N.D.
-0.1
-0.3
+0.1
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.2
-0.2
-0.0
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.0
-0.1
-0.1
-0.3
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.0
+0.0
-0.1
-0.3
pH
R2A_PIPES pH 4.5
N.D.
-0.2
-0.3
-0.2
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.1
-0.1
-0.1
-0.1
no stress control
no stress control
N.D.
-0.1
-0.1
+0.1
-0.1
pH
R2A_PIPES pH 4.25
N.D.
-0.2
+0.2
+0.8
-1.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.1
-0.3
+0.1
-0.1
no stress control
no stress control
N.D.
-0.1
+0.2
+0.0
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.0
+0.0
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.0
+0.0
-0.1
-0.0
no stress control
no stress control
N.D.
+0.0
+0.1
+0.1
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.1
-0.1
+0.1
+0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.1
+0.1
+0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.0
+0.0
+0.1
-0.1
pH
R2A_PIPES pH 4.25
N.D.
-0.1
-0.5
+0.6
+0.0
no stress control
no stress control
N.D.
-0.1
+0.3
+0.0
-0.2
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