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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS05145 and LRK55_RS05150 are separated by 492 nucleotides
LRK55_RS05150 and LRK55_RS05155 are separated by 218 nucleotides
LRK55_RS05155 and LRK55_RS05160 are separated by 53 nucleotides
LRK55_RS05160 and LRK55_RS05165 are separated by 59 nucleotides
LRK55_RS05145: LRK55_RS05145 - aspartate/glutamate racemase family protein, at 1,109,533 to 1,110,231
_RS05145
LRK55_RS05150: LRK55_RS05150 - IS4 family transposase, at 1,110,724 to 1,111,896
_RS05150
LRK55_RS05155: LRK55_RS05155 - peptide chain release factor 3, at 1,112,115 to 1,113,716
_RS05155
LRK55_RS05160: LRK55_RS05160 - type II CAAX endopeptidase family protein, at 1,113,770 to 1,114,666
_RS05160
LRK55_RS05165: LRK55_RS05165 - response regulator, at 1,114,726 to 1,117,563
_RS05165
Group
Condition
LRK55
_RS05145
LRK55
_RS05150
LRK55
_RS05155
LRK55
_RS05160
LRK55
_RS05165
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
N.D.
N.D.
-2.5
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
N.D.
N.D.
-1.3
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.5
N.D.
N.D.
-0.7
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
N.D.
N.D.
-0.9
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.1
N.D.
N.D.
-0.9
+0.0
no stress control
no stress control
-0.2
N.D.
N.D.
-0.5
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
N.D.
N.D.
-1.1
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
N.D.
N.D.
-0.6
+0.1
pH
R2A_PIPES pH 4.5
-0.1
N.D.
N.D.
-0.6
+0.0
no stress control
no stress control
-0.2
N.D.
N.D.
-0.3
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
N.D.
N.D.
-0.1
-0.0
no stress control
no stress control
-0.1
N.D.
N.D.
-0.4
+0.0
no stress control
no stress control
-0.2
N.D.
N.D.
-0.1
-0.1
pH
R2A_PIPES pH 4.25
-0.3
N.D.
N.D.
-0.7
+0.5
no stress control
no stress control
-0.2
N.D.
N.D.
-0.1
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
N.D.
N.D.
-0.4
+0.1
pH
R2A_PIPES pH 4.5
-0.3
N.D.
N.D.
-0.0
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
N.D.
N.D.
-0.5
+0.3
no stress control
no stress control
-0.0
N.D.
N.D.
-0.2
-0.0
pH
R2A_PIPES pH 4.25
-0.3
N.D.
N.D.
+0.2
+0.1
no stress control
no stress control
+0.0
N.D.
N.D.
+0.2
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
N.D.
N.D.
+0.3
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
N.D.
N.D.
+0.3
+0.2
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