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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS04995 and LRK55_RS05000 are separated by 102 nucleotides
LRK55_RS05000 and LRK55_RS05005 are separated by 130 nucleotides
LRK55_RS05005 and LRK55_RS05010 are separated by 370 nucleotides
LRK55_RS05010 and LRK55_RS05015 overlap by 4 nucleotides
LRK55_RS04995: LRK55_RS04995 - DedA family protein/thiosulfate sulfurtransferase GlpE, at 1,074,147 to 1,075,124
_RS04995
LRK55_RS05000: LRK55_RS05000 - MFS transporter, at 1,075,227 to 1,076,429
_RS05000
LRK55_RS05005: LRK55_RS05005 - polyprenyl synthetase family protein, at 1,076,560 to 1,077,561
_RS05005
LRK55_RS05010: LRK55_RS05010 - YceI family protein, at 1,077,932 to 1,078,549
_RS05010
LRK55_RS05015: LRK55_RS05015 - cytochrome b, at 1,078,546 to 1,079,127
_RS05015
Group
Condition
LRK55
_RS04995
LRK55
_RS05000
LRK55
_RS05005
LRK55
_RS05010
LRK55
_RS05015
pH
R2A_PIPES pH 4.25
-0.6
-1.1
N.D.
+0.2
-2.9
pH
R2A_PIPES pH 4.25
+0.1
-1.4
N.D.
-0.8
-2.0
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.9
N.D.
-0.6
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.4
N.D.
+0.4
-1.6
pH
R2A_PIPES pH 4.5
-0.1
-0.3
N.D.
-0.7
-0.5
stress
R2A with Zinc chloride 2560 uM
+0.1
-1.4
N.D.
-0.3
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.2
N.D.
-0.2
-0.8
pH
R2A_PIPES pH 4.5
+0.1
-0.3
N.D.
-0.5
-0.5
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
-0.6
N.D.
+0.1
-0.3
no stress control
no stress control
+0.1
-0.3
N.D.
-0.1
-0.2
no stress control
no stress control
+0.0
+0.0
N.D.
-0.3
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
-0.2
N.D.
-0.1
-0.3
no stress control
no stress control
-0.1
-0.3
N.D.
-0.2
+0.3
no stress control
no stress control
+0.3
+0.1
N.D.
-0.1
-0.2
no stress control
no stress control
-0.0
+0.1
N.D.
-0.2
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.1
N.D.
-0.3
+0.0
no stress control
no stress control
-0.1
+0.4
N.D.
-0.3
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
-0.0
N.D.
+0.3
+0.0
no stress control
no stress control
+0.2
+0.1
N.D.
+0.1
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.9
N.D.
+0.1
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
+0.4
+0.1
N.D.
+0.3
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
+1.0
N.D.
-0.0
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.1
N.D.
+0.5
-0.1
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