Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS04750 and LRK55_RS04755 are separated by 196 nucleotidesLRK55_RS04755 and LRK55_RS04760 are separated by 76 nucleotidesLRK55_RS04760 and LRK55_RS04765 are separated by 14 nucleotidesLRK55_RS04765 and LRK55_RS04770 are separated by 194 nucleotides LRK55_RS04750: LRK55_RS04750 - outer membrane protein assembly factor BamD, at 1,010,359 to 1,011,192 _RS04750 LRK55_RS04755: LRK55_RS04755 - NAD+ synthase, at 1,011,389 to 1,013,047 _RS04755 LRK55_RS04760: LRK55_RS04760 - succinate--CoA ligase subunit alpha, at 1,013,124 to 1,013,996 _RS04760 LRK55_RS04765: LRK55_RS04765 - ADP-forming succinate--CoA ligase subunit beta, at 1,014,011 to 1,015,297 _RS04765 LRK55_RS04770: LRK55_RS04770 - HAMP domain-containing sensor histidine kinase, at 1,015,492 to 1,017,144 _RS04770
Group Condition LRK55_RS04750 LRK55_RS04755 LRK55_RS04760 LRK55_RS04765 LRK55_RS04770
pH R2A_PIPES pH 4.5 N.D. N.D. -4.2 -3.6 +0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. -4.1 -3.2 +0.0
stress R2A with Zinc chloride 2560 uM N.D. N.D. -4.2 -3.6 +0.8
stress R2A with Zinc chloride 2560 uM N.D. N.D. -4.4 -3.3 +0.7
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. -4.0 -3.0 +0.3
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. -4.2 -3.2 +0.8
pH R2A_PIPES pH 4.5 N.D. N.D. -3.2 -3.4 +0.1
no stress control no stress control N.D. N.D. -4.2 -3.0 +0.7
no stress control no stress control N.D. N.D. -4.3 -2.7 +0.8
no stress control no stress control N.D. N.D. -3.8 -3.1 +0.6
no stress control no stress control N.D. N.D. -3.7 -3.2 +0.7
no stress control no stress control N.D. N.D. -3.8 -3.0 +0.6
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. -3.5 -2.7 +0.2
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. -3.5 -2.8 +0.6
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. -2.9 -3.6 +0.9
no stress control no stress control N.D. N.D. -2.7 -3.2 +0.6
pH R2A_PIPES pH 4.25 N.D. N.D. -3.0 -3.0 +1.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. -2.9 -2.5 +0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. -2.5 -2.8 +0.4
no stress control no stress control N.D. N.D. -2.2 -3.1 +0.6
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. -2.3 -2.8 +0.4
pH R2A_PIPES pH 4.25 N.D. N.D. -2.7 -2.9 +0.9
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. -2.1 -2.8 +0.9
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