Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS04740 and LRK55_RS04745 are separated by 93 nucleotidesLRK55_RS04745 and LRK55_RS04750 are separated by 104 nucleotidesLRK55_RS04750 and LRK55_RS04755 are separated by 196 nucleotidesLRK55_RS04755 and LRK55_RS04760 are separated by 76 nucleotides LRK55_RS04740: LRK55_RS04740 - peptidoglycan editing factor PgeF, at 1,008,437 to 1,009,186 _RS04740 LRK55_RS04745: LRK55_RS04745 - 23S rRNA pseudouridine(1911/1915/1917) synthase RluD, at 1,009,280 to 1,010,254 _RS04745 LRK55_RS04750: LRK55_RS04750 - outer membrane protein assembly factor BamD, at 1,010,359 to 1,011,192 _RS04750 LRK55_RS04755: LRK55_RS04755 - NAD+ synthase, at 1,011,389 to 1,013,047 _RS04755 LRK55_RS04760: LRK55_RS04760 - succinate--CoA ligase subunit alpha, at 1,013,124 to 1,013,996 _RS04760
Group Condition LRK55_RS04740 LRK55_RS04745 LRK55_RS04750 LRK55_RS04755 LRK55_RS04760
stress R2A with Nickel (II) chloride 1696 uM -0.9 -1.0 N.D. N.D. -4.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.4 -1.7 N.D. N.D. -3.5
no stress control no stress control -0.1 +0.1 N.D. N.D. -4.3
no stress control no stress control -0.2 +0.2 N.D. N.D. -4.2
no stress control no stress control -0.2 -0.0 N.D. N.D. -3.8
stress R2A with Zinc chloride 2560 uM -0.5 +0.8 N.D. N.D. -4.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 -1.2 N.D. N.D. -2.9
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.4 +0.7 N.D. N.D. -4.1
stress R2A_PIPES with Cadmium chloride 64 uM -0.7 +0.6 N.D. N.D. -3.5
stress R2A_PIPES with Cadmium chloride 64 uM -0.8 -0.5 N.D. N.D. -2.1
no stress control no stress control +0.2 +0.1 N.D. N.D. -3.7
no stress control no stress control +0.3 +0.2 N.D. N.D. -3.8
pH R2A_PIPES pH 4.5 +0.0 +0.9 N.D. N.D. -4.2
stress R2A with Zinc chloride 2560 uM +0.2 +0.9 N.D. N.D. -4.4
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 +1.2 N.D. N.D. -4.0
no stress control no stress control -0.1 -0.1 N.D. N.D. -2.7
stress R2A with Nickel (II) chloride 1696 uM -0.0 +0.3 N.D. N.D. -2.9
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.4 -0.5 N.D. N.D. -2.5
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.0 -0.1 N.D. N.D. -2.3
pH R2A_PIPES pH 4.5 +0.0 +0.9 N.D. N.D. -3.2
no stress control no stress control +0.4 +0.5 N.D. N.D. -2.2
pH R2A_PIPES pH 4.25 -0.2 +2.1 N.D. N.D. -3.0
pH R2A_PIPES pH 4.25 +0.3 +2.3 N.D. N.D. -2.7
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