Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS04590 and LRK55_RS04595 are separated by 295 nucleotidesLRK55_RS04595 and LRK55_RS04600 are separated by 3 nucleotidesLRK55_RS04600 and LRK55_RS04605 overlap by 4 nucleotidesLRK55_RS04605 and LRK55_RS04610 are separated by 26 nucleotides LRK55_RS04590: LRK55_RS04590 - VTT domain-containing protein, at 976,419 to 977,141 _RS04590 LRK55_RS04595: LRK55_RS04595 - type IV pilin protein, at 977,437 to 977,928 _RS04595 LRK55_RS04600: LRK55_RS04600 - GspH/FimT family pseudopilin, at 977,932 to 978,402 _RS04600 LRK55_RS04605: LRK55_RS04605 - type IV pilus modification protein PilV, at 978,399 to 978,950 _RS04605 LRK55_RS04610: LRK55_RS04610 - PilW family protein, at 978,977 to 980,059 _RS04610
Group Condition LRK55_RS04590 LRK55_RS04595 LRK55_RS04600 LRK55_RS04605 LRK55_RS04610
stress R2A_PIPES with Cadmium chloride 64 uM -0.3 -0.3 N.D. -0.2 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 -0.2 N.D. -0.1 +0.0
stress R2A with Nickel (II) chloride 1696 uM -0.1 -0.1 N.D. -0.4 +0.1
stress R2A_PIPES with Cadmium chloride 64 uM -0.2 -0.0 N.D. -0.2 +0.1
no stress control no stress control -0.1 -0.3 N.D. +0.1 +0.1
stress R2A with Nickel (II) chloride 1696 uM -0.2 -0.2 N.D. +0.3 +0.0
no stress control no stress control +0.1 +0.0 N.D. -0.2 +0.1
pH R2A_PIPES pH 4.5 +0.3 -0.1 N.D. -0.4 +0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 -0.3 N.D. -0.0 +0.3
no stress control no stress control +0.0 -0.0 N.D. -0.1 +0.2
no stress control no stress control -0.1 -0.1 N.D. +0.0 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 -0.2 N.D. +0.3 +0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 -0.1 N.D. +0.0 +0.1
no stress control no stress control +0.1 +0.1 N.D. -0.0 +0.2
no stress control no stress control -0.0 +0.1 N.D. +0.1 +0.2
stress R2A with Zinc chloride 2560 uM -0.0 +0.1 N.D. +0.1 +0.2
no stress control no stress control +0.1 -0.0 N.D. +0.2 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 +0.1 N.D. +0.5 +0.1
stress R2A with Zinc chloride 2560 uM -0.1 +0.2 N.D. +0.3 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 +0.2 N.D. +0.4 +0.1
pH R2A_PIPES pH 4.5 +0.3 +0.0 N.D. +0.2 +0.2
pH R2A_PIPES pH 4.25 +1.7 +0.0 N.D. -0.5 +0.0
pH R2A_PIPES pH 4.25 +1.3 -0.3 N.D. +0.1 +0.4
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