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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS04395 and LRK55_RS04400 are separated by 9 nucleotides
LRK55_RS04400 and LRK55_RS04405 are separated by 189 nucleotides
LRK55_RS04405 and LRK55_RS04410 are separated by 103 nucleotides
LRK55_RS04410 and LRK55_RS04415 are separated by 24 nucleotides
LRK55_RS04395: LRK55_RS04395 - CTP synthase, at 938,394 to 939,092
_RS04395
LRK55_RS04400: LRK55_RS04400 - serine hydroxymethyltransferase, at 939,102 to 940,355
_RS04400
LRK55_RS04405: LRK55_RS04405 - energy-dependent translational throttle protein EttA, at 940,545 to 942,212
_RS04405
LRK55_RS04410: LRK55_RS04410 - orotidine-5'-phosphate decarboxylase, at 942,316 to 943,134
_RS04410
LRK55_RS04415: LRK55_RS04415 - hypothetical protein, at 943,159 to 943,416
_RS04415
Group
Condition
LRK55
_RS04395
LRK55
_RS04400
LRK55
_RS04405
LRK55
_RS04410
LRK55
_RS04415
no stress control
no stress control
+0.1
-0.8
N.D.
-3.7
+0.0
stress
R2A with Zinc chloride 2560 uM
+0.3
-0.5
N.D.
-3.7
+0.2
no stress control
no stress control
-0.1
-0.9
N.D.
-2.0
-0.3
stress
R2A with Zinc chloride 2560 uM
+0.4
-0.2
N.D.
-3.6
+0.4
no stress control
no stress control
+0.1
-1.0
N.D.
-2.0
-0.1
no stress control
no stress control
+0.0
-0.9
N.D.
-2.0
-0.1
no stress control
no stress control
-0.1
-0.9
N.D.
-1.0
-0.4
pH
R2A_PIPES pH 4.5
+0.3
-0.7
N.D.
-1.6
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.7
N.D.
-1.9
+0.3
pH
R2A_PIPES pH 4.5
+0.4
-0.6
N.D.
-1.7
-0.2
no stress control
no stress control
+0.1
-0.7
N.D.
-1.5
-0.0
no stress control
no stress control
+0.3
-0.9
N.D.
-1.7
+0.3
pH
R2A_PIPES pH 4.25
+0.3
+0.2
N.D.
-2.8
+0.3
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
-0.5
N.D.
-1.3
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.8
N.D.
-0.4
-0.6
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.5
N.D.
-1.3
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
-0.3
N.D.
-1.6
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.3
N.D.
-1.7
+0.4
pH
R2A_PIPES pH 4.25
+1.4
+0.3
N.D.
-2.1
-0.7
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
-0.5
N.D.
-0.8
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
-0.4
N.D.
-0.5
+0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
-0.6
N.D.
+0.6
-0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
-0.5
N.D.
+1.0
-0.1
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