Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS04360 and LRK55_RS04365 are separated by 83 nucleotidesLRK55_RS04365 and LRK55_RS04370 are separated by 144 nucleotidesLRK55_RS04370 and LRK55_RS04375 are separated by 423 nucleotidesLRK55_RS04375 and LRK55_RS04380 are separated by 90 nucleotides LRK55_RS04360: LRK55_RS04360 - muramoyltetrapeptide carboxypeptidase, at 931,277 to 932,221 _RS04360 LRK55_RS04365: LRK55_RS04365 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 932,305 to 933,396 _RS04365 LRK55_RS04370: LRK55_RS04370 - riboflavin synthase, at 933,541 to 934,182 _RS04370 LRK55_RS04375: LRK55_RS04375 - LysR family transcriptional regulator, at 934,606 to 935,517 _RS04375 LRK55_RS04380: LRK55_RS04380 - NAD(P)-dependent alcohol dehydrogenase, at 935,608 to 936,618 _RS04380
Group Condition LRK55_RS04360 LRK55_RS04365 LRK55_RS04370 LRK55_RS04375 LRK55_RS04380
no stress control no stress control -4.2 N.D. N.D. +0.1 -0.0
no stress control no stress control -4.1 N.D. N.D. +0.0 -0.0
no stress control no stress control -4.1 N.D. N.D. +0.1 -0.1
pH R2A_PIPES pH 4.5 -3.9 N.D. N.D. +0.0 -0.1
stress R2A with Nickel (II) chloride 1696 uM -3.9 N.D. N.D. +0.0 -0.1
no stress control no stress control -3.9 N.D. N.D. -0.0 +0.0
pH R2A_PIPES pH 4.5 -4.0 N.D. N.D. +0.1 +0.0
stress R2A_PIPES with Cadmium chloride 64 uM -3.6 N.D. N.D. +0.2 -0.4
stress R2A with Nickel (II) chloride 1696 uM -3.8 N.D. N.D. +0.0 +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -3.9 N.D. N.D. +0.1 +0.1
no stress control no stress control -3.7 N.D. N.D. +0.1 -0.0
stress R2A_PIPES with Aluminum chloride 0.140625 mM -3.6 N.D. N.D. +0.0 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -3.7 N.D. N.D. +0.1 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x -3.8 N.D. N.D. +0.0 +0.2
pH R2A_PIPES pH 4.25 -3.3 N.D. N.D. +0.2 -0.3
no stress control no stress control -3.4 N.D. N.D. +0.2 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM -3.8 N.D. N.D. +0.2 +0.1
no stress control no stress control -3.6 N.D. N.D. +0.1 +0.1
stress R2A with Zinc chloride 2560 uM -3.3 N.D. N.D. +0.1 -0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x -3.7 N.D. N.D. +0.1 +0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM -3.2 N.D. N.D. +0.0 -0.0
stress R2A with Zinc chloride 2560 uM -3.2 N.D. N.D. +0.2 +0.1
pH R2A_PIPES pH 4.25 -2.7 N.D. N.D. +0.3 -0.1
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