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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS04205 and LRK55_RS04210 are separated by 135 nucleotides
LRK55_RS04210 and LRK55_RS04215 are separated by 10 nucleotides
LRK55_RS04215 and LRK55_RS04220 are separated by 103 nucleotides
LRK55_RS04220 and LRK55_RS04225 are separated by 175 nucleotides
LRK55_RS04205: LRK55_RS04205 - ABC transporter permease, at 892,342 to 893,655
_RS04205
LRK55_RS04210: LRK55_RS04210 - ABC transporter permease, at 893,791 to 895,032
_RS04210
LRK55_RS04215: LRK55_RS04215 - ABC transporter permease, at 895,043 to 896,353
_RS04215
LRK55_RS04220: LRK55_RS04220 - ABC transporter ATP-binding protein, at 896,457 to 897,173
_RS04220
LRK55_RS04225: LRK55_RS04225 - efflux RND transporter periplasmic adaptor subunit, at 897,349 to 898,620
_RS04225
Group
Condition
LRK55
_RS04205
LRK55
_RS04210
LRK55
_RS04215
LRK55
_RS04220
LRK55
_RS04225
pH
R2A_PIPES pH 4.25
-0.4
-0.0
+0.1
-1.9
-2.3
pH
R2A_PIPES pH 4.25
+0.0
+0.5
+0.3
-2.4
-2.4
stress
R2A with Zinc chloride 2560 uM
-0.3
+0.2
-0.1
-1.8
-1.9
stress
R2A with Zinc chloride 2560 uM
+0.0
-0.1
+0.0
-1.3
-1.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.0
+0.0
-2.1
-1.1
pH
R2A_PIPES pH 4.5
-0.3
-0.0
-0.2
-0.8
-1.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
+0.0
+0.1
-0.4
-1.6
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
+0.0
-0.3
-0.7
-0.9
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.1
-0.0
-1.1
-0.7
pH
R2A_PIPES pH 4.5
-0.1
-0.0
+0.1
-0.7
-1.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
+0.1
-0.0
-0.8
-0.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.0
+0.3
-1.1
-0.6
no stress control
no stress control
+0.2
+0.0
+0.0
-0.8
-0.9
no stress control
no stress control
+0.1
+0.2
+0.0
-1.0
-0.5
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
+0.0
+0.0
-0.5
-0.7
no stress control
no stress control
-0.1
+0.0
+0.1
-0.6
-0.6
no stress control
no stress control
+0.2
-0.0
+0.1
-0.9
-0.6
no stress control
no stress control
+0.2
+0.1
+0.1
-0.8
-0.7
no stress control
no stress control
+0.1
-0.0
-0.1
-0.7
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.2
-0.1
-0.4
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.1
-0.0
+0.1
-0.9
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
-0.2
+0.0
-0.1
-0.6
no stress control
no stress control
+0.1
+0.0
+0.2
-0.3
-0.1
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