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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS04170 and LRK55_RS04175 are separated by 76 nucleotides
LRK55_RS04175 and LRK55_RS04180 are separated by 74 nucleotides
LRK55_RS04180 and LRK55_RS04185 are separated by 11 nucleotides
LRK55_RS04185 and LRK55_RS04190 are separated by 67 nucleotides
LRK55_RS04170: LRK55_RS04170 - sigma-54 dependent transcriptional regulator, at 882,419 to 883,768
_RS04170
LRK55_RS04175: LRK55_RS04175 - DUF885 family protein, at 883,845 to 885,677
_RS04175
LRK55_RS04180: LRK55_RS04180 - FtsX-like permease family protein, at 885,752 to 886,963
_RS04180
LRK55_RS04185: LRK55_RS04185 - ABC transporter permease, at 886,975 to 888,264
_RS04185
LRK55_RS04190: LRK55_RS04190 - FtsX-like permease family protein, at 888,332 to 889,564
_RS04190
Group
Condition
LRK55
_RS04170
LRK55
_RS04175
LRK55
_RS04180
LRK55
_RS04185
LRK55
_RS04190
pH
R2A_PIPES pH 4.25
+0.5
-0.1
-0.7
-0.3
-0.1
pH
R2A_PIPES pH 4.5
-0.2
-0.1
-0.1
-0.2
+0.1
no stress control
no stress control
-0.0
-0.0
+0.1
-0.4
-0.1
no stress control
no stress control
-0.0
+0.1
+0.1
-0.4
-0.1
no stress control
no stress control
+0.0
+0.1
-0.3
-0.0
-0.1
no stress control
no stress control
+0.1
+0.2
-0.1
-0.2
-0.2
pH
R2A_PIPES pH 4.5
+0.2
+0.0
-0.1
-0.3
-0.0
no stress control
no stress control
+0.0
+0.1
-0.1
-0.2
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
-0.1
-0.1
-0.0
-0.1
stress
R2A with Zinc chloride 2560 uM
+0.2
+0.2
-0.1
-0.4
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
+0.1
-0.1
-0.1
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
+0.2
+0.0
-0.1
-0.3
no stress control
no stress control
+0.1
+0.1
+0.0
-0.1
-0.1
stress
R2A with Zinc chloride 2560 uM
+0.3
-0.0
-0.0
-0.3
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.1
-0.2
-0.0
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.0
-0.1
-0.1
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
-0.1
-0.1
+0.0
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.0
-0.1
-0.2
+0.1
pH
R2A_PIPES pH 4.25
+0.3
-0.1
-0.1
-0.3
+0.3
no stress control
no stress control
+0.1
+0.1
+0.1
-0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.2
-0.1
-0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.0
+0.0
+0.0
+0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.1
+0.1
+0.0
+0.0
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