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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS04145 and LRK55_RS04150 overlap by 4 nucleotides
LRK55_RS04150 and LRK55_RS04155 are separated by 10 nucleotides
LRK55_RS04155 and LRK55_RS04160 are separated by 184 nucleotides
LRK55_RS04160 and LRK55_RS04165 are separated by 31 nucleotides
LRK55_RS04145: LRK55_RS04145 - threonine/serine exporter family protein, at 877,733 to 879,013
_RS04145
LRK55_RS04150: LRK55_RS04150 - NfeD family protein, at 879,010 to 879,456
_RS04150
LRK55_RS04155: LRK55_RS04155 - SPFH domain-containing protein, at 879,467 to 880,411
_RS04155
LRK55_RS04160: LRK55_RS04160 - ATP-binding protein, at 880,596 to 881,981
_RS04160
LRK55_RS04165: LRK55_RS04165 - hypothetical protein, at 882,013 to 882,339
_RS04165
Group
Condition
LRK55
_RS04145
LRK55
_RS04150
LRK55
_RS04155
LRK55
_RS04160
LRK55
_RS04165
pH
R2A_PIPES pH 4.25
-1.6
-1.3
-0.2
-0.2
N.D.
pH
R2A_PIPES pH 4.25
-1.4
-0.9
-0.4
+0.1
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
-0.5
+0.2
-0.4
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
+0.0
-0.2
-0.3
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.6
-0.7
-0.1
+0.4
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-0.6
-0.2
+0.3
N.D.
pH
R2A_PIPES pH 4.5
-0.7
-0.1
-0.3
+0.2
N.D.
no stress control
no stress control
-0.3
-0.4
-0.2
-0.0
N.D.
no stress control
no stress control
-0.2
-0.8
-0.2
+0.3
N.D.
no stress control
no stress control
-0.2
-0.2
-0.4
-0.0
N.D.
pH
R2A_PIPES pH 4.5
-0.6
-0.1
-0.3
+0.2
N.D.
no stress control
no stress control
-0.2
-0.4
-0.2
+0.1
N.D.
no stress control
no stress control
-0.5
-0.0
-0.3
+0.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.7
+0.2
-0.2
+0.0
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
-0.2
-0.1
+0.2
N.D.
no stress control
no stress control
-0.2
+0.1
-0.3
-0.1
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.3
-0.1
+0.2
N.D.
no stress control
no stress control
-0.5
-0.0
+0.1
-0.0
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
-0.4
-0.2
+0.3
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.1
-0.3
+0.0
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.6
-0.0
-0.0
+0.4
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.1
-0.1
+0.3
N.D.
stress
R2A with Zinc chloride 2560 uM
+0.1
+0.0
-0.4
+0.2
N.D.
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