Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS04075 and LRK55_RS04080 are separated by 53 nucleotidesLRK55_RS04080 and LRK55_RS04085 overlap by 4 nucleotidesLRK55_RS04085 and LRK55_RS04090 are separated by 108 nucleotidesLRK55_RS04090 and LRK55_RS04095 are separated by 5 nucleotides LRK55_RS04075: LRK55_RS04075 - SDR family oxidoreductase, at 864,724 to 865,557 _RS04075 LRK55_RS04080: LRK55_RS04080 - shikimate kinase, at 865,611 to 866,165 _RS04080 LRK55_RS04085: LRK55_RS04085 - 3-dehydroquinate synthase, at 866,162 to 867,253 _RS04085 LRK55_RS04090: LRK55_RS04090 - WGR domain-containing protein, at 867,362 to 867,622 _RS04090 LRK55_RS04095: LRK55_RS04095 - uroporphyrinogen decarboxylase, at 867,628 to 868,698 _RS04095
Group Condition LRK55_RS04075 LRK55_RS04080 LRK55_RS04085 LRK55_RS04090 LRK55_RS04095
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 N.D. N.D. -2.2 N.D.
no stress control no stress control +0.2 N.D. N.D. -1.9 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 N.D. N.D. -1.7 N.D.
no stress control no stress control +0.1 N.D. N.D. -1.4 N.D.
stress R2A with Zinc chloride 2560 uM -0.0 N.D. N.D. -0.8 N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.0 N.D. N.D. -0.8 N.D.
stress R2A with Zinc chloride 2560 uM -0.0 N.D. N.D. -0.7 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.2 N.D. N.D. -0.8 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 N.D. N.D. -0.3 N.D.
no stress control no stress control +0.2 N.D. N.D. -0.6 N.D.
no stress control no stress control +0.1 N.D. N.D. -0.5 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 N.D. N.D. -0.5 N.D.
no stress control no stress control +0.3 N.D. N.D. -0.6 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.3 N.D. N.D. -0.5 N.D.
no stress control no stress control +0.2 N.D. N.D. -0.4 N.D.
no stress control no stress control +0.1 N.D. N.D. -0.3 N.D.
pH R2A_PIPES pH 4.5 +0.2 N.D. N.D. -0.4 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.2 N.D. N.D. -0.1 N.D.
pH R2A_PIPES pH 4.5 +0.2 N.D. N.D. -0.1 N.D.
pH R2A_PIPES pH 4.25 -0.0 N.D. N.D. +0.6 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 N.D. N.D. +0.5 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 N.D. N.D. +0.6 N.D.
pH R2A_PIPES pH 4.25 -0.0 N.D. N.D. +0.8 N.D.
remove
LRK55_RS04075
plot
remove
LRK55_RS04080
plot
remove
LRK55_RS04085
remove
LRK55_RS04090
plot
remove
LRK55_RS04095
plot