Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS04040 and LRK55_RS04045 are separated by 803 nucleotidesLRK55_RS04045 and LRK55_RS04050 are separated by 4 nucleotidesLRK55_RS04050 and LRK55_RS04055 overlap by 4 nucleotidesLRK55_RS04055 and LRK55_RS04060 are separated by 233 nucleotides LRK55_RS04040: LRK55_RS04040 - IS4 family transposase, at 859,096 to 860,268 _RS04040 LRK55_RS04045: LRK55_RS04045 - ABC transporter substrate-binding protein, at 861,072 to 861,896 _RS04045 LRK55_RS04050: LRK55_RS04050 - secondary thiamine-phosphate synthase enzyme YjbQ, at 861,901 to 862,341 _RS04050 LRK55_RS04055: LRK55_RS04055 - pyridoxamine 5'-phosphate oxidase, at 862,338 to 862,925 _RS04055 LRK55_RS04060: LRK55_RS04060 - kinase, at 863,159 to 863,989 _RS04060
Group Condition LRK55_RS04040 LRK55_RS04045 LRK55_RS04050 LRK55_RS04055 LRK55_RS04060
pH R2A_PIPES pH 4.25 N.D. -0.2 +0.1 N.D. -3.2
pH R2A_PIPES pH 4.25 N.D. +0.2 +0.4 N.D. -3.8
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. -0.2 -0.3 N.D. -0.6
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. -0.2 -0.5 N.D. -0.3
stress R2A with Zinc chloride 2560 uM N.D. -0.1 +0.0 N.D. -0.8
pH R2A_PIPES pH 4.5 N.D. -0.1 -0.3 N.D. -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. -0.1 +0.1 N.D. -0.5
pH R2A_PIPES pH 4.5 N.D. -0.0 -0.2 N.D. -0.2
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.2 -0.3 N.D. +0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.1 -0.1 N.D. -0.4
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.2 -0.3 N.D. +0.2
no stress control no stress control N.D. -0.3 -0.1 N.D. +0.1
stress R2A with Zinc chloride 2560 uM N.D. -0.0 +0.1 N.D. -0.4
no stress control no stress control N.D. -0.1 -0.2 N.D. +0.1
no stress control no stress control N.D. +0.0 -0.2 N.D. +0.2
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.0 -0.1 N.D. +0.2
no stress control no stress control N.D. -0.2 +0.3 N.D. -0.0
no stress control no stress control N.D. -0.0 -0.0 N.D. +0.2
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.1 -0.2 N.D. +0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. -0.0 +0.0 N.D. +0.2
no stress control no stress control N.D. -0.1 +0.0 N.D. +0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. -0.0 +0.1 N.D. +0.3
no stress control no stress control N.D. -0.1 +0.2 N.D. +0.3
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