Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS04020 and LRK55_RS04025 are separated by 153 nucleotidesLRK55_RS04025 and LRK55_RS04030 are separated by 368 nucleotidesLRK55_RS04030 and LRK55_RS04035 overlap by 4 nucleotidesLRK55_RS04035 and LRK55_RS04040 are separated by 121 nucleotides LRK55_RS04020: LRK55_RS04020 - PilT/PilU family type 4a pilus ATPase, at 854,852 to 856,018 _RS04020 LRK55_RS04025: LRK55_RS04025 - type IV pilus twitching motility protein PilT, at 856,172 to 857,209 _RS04025 LRK55_RS04030: LRK55_RS04030 - pyrroline-5-carboxylate reductase, at 857,578 to 858,402 _RS04030 LRK55_RS04035: LRK55_RS04035 - YggT family protein, at 858,399 to 858,974 _RS04035 LRK55_RS04040: LRK55_RS04040 - IS4 family transposase, at 859,096 to 860,268 _RS04040
Group Condition LRK55_RS04020 LRK55_RS04025 LRK55_RS04030 LRK55_RS04035 LRK55_RS04040
stress R2A with Zinc chloride 2560 uM -0.0 -0.7 N.D. -0.8 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.0 -0.2 N.D. -0.5 N.D.
stress R2A with Zinc chloride 2560 uM +0.1 -0.3 N.D. -0.5 N.D.
pH R2A_PIPES pH 4.5 +0.2 -0.0 N.D. -0.7 N.D.
no stress control no stress control -0.1 +0.7 N.D. -1.1 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.3 -0.1 N.D. -0.5 N.D.
pH R2A_PIPES pH 4.5 -0.1 +0.4 N.D. -0.4 N.D.
no stress control no stress control -0.1 +0.6 N.D. -0.7 N.D.
pH R2A_PIPES pH 4.25 +0.3 +0.5 N.D. -0.9 N.D.
no stress control no stress control +0.1 +0.6 N.D. -0.8 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 +0.2 N.D. -0.3 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.3 +0.2 N.D. -0.5 N.D.
no stress control no stress control -0.1 +0.7 N.D. -0.5 N.D.
no stress control no stress control +0.0 +0.6 N.D. -0.4 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.1 +0.8 N.D. -0.6 N.D.
pH R2A_PIPES pH 4.25 -0.0 +0.7 N.D. -0.3 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.2 +0.4 N.D. -0.1 N.D.
no stress control no stress control +0.3 +0.5 N.D. -0.3 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.0 +0.5 N.D. +0.1 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 +0.5 N.D. -0.1 N.D.
no stress control no stress control +0.2 +0.6 N.D. -0.2 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +2.5 +0.1 N.D. -1.0 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +2.4 -0.0 N.D. -0.7 N.D.
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