Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS04005 and LRK55_RS04010 are separated by 145 nucleotidesLRK55_RS04010 and LRK55_RS04015 are separated by 352 nucleotidesLRK55_RS04015 and LRK55_RS04020 are separated by 66 nucleotidesLRK55_RS04020 and LRK55_RS04025 are separated by 153 nucleotides LRK55_RS04005: LRK55_RS04005 - response regulator transcription factor, at 851,007 to 851,699 _RS04005 LRK55_RS04010: LRK55_RS04010 - TonB-dependent siderophore receptor, at 851,845 to 854,055 _RS04010 LRK55_RS04015: LRK55_RS04015 - BON domain-containing protein, at 854,408 to 854,785 _RS04015 LRK55_RS04020: LRK55_RS04020 - PilT/PilU family type 4a pilus ATPase, at 854,852 to 856,018 _RS04020 LRK55_RS04025: LRK55_RS04025 - type IV pilus twitching motility protein PilT, at 856,172 to 857,209 _RS04025
Group Condition LRK55_RS04005 LRK55_RS04010 LRK55_RS04015 LRK55_RS04020 LRK55_RS04025
stress R2A with Zinc chloride 2560 uM -3.1 -3.4 N.D. -0.0 -0.7
stress R2A with Zinc chloride 2560 uM -3.4 -3.3 N.D. +0.1 -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x -4.3 -4.3 N.D. +2.4 -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x -4.2 -4.5 N.D. +2.5 +0.1
stress R2A with Nickel (II) chloride 1696 uM -2.2 -2.0 N.D. +0.2 +0.4
stress R2A with Nickel (II) chloride 1696 uM -1.8 -2.1 N.D. +0.1 +0.8
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -1.5 -1.4 N.D. +0.0 +0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -1.2 -1.2 N.D. +0.3 +0.5
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.4 -0.6 N.D. +0.0 +0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.4 -0.6 N.D. +0.3 +0.2
pH R2A_PIPES pH 4.5 -0.0 +0.2 N.D. -0.1 +0.4
pH R2A_PIPES pH 4.5 -0.0 +0.3 N.D. +0.2 -0.0
no stress control no stress control +0.0 -0.1 N.D. -0.1 +0.7
no stress control no stress control +0.1 -0.1 N.D. -0.1 +0.7
no stress control no stress control +0.1 +0.0 N.D. -0.1 +0.6
no stress control no stress control +0.1 -0.1 N.D. +0.1 +0.6
no stress control no stress control +0.0 -0.0 N.D. +0.0 +0.6
no stress control no stress control -0.2 +0.1 N.D. +0.3 +0.5
pH R2A_PIPES pH 4.25 -0.1 +0.1 N.D. +0.3 +0.5
stress R2A_PIPES with Cadmium chloride 64 uM +0.5 +0.6 N.D. -0.0 -0.2
no stress control no stress control +0.0 +0.1 N.D. +0.2 +0.6
stress R2A_PIPES with Cadmium chloride 64 uM +0.5 +0.5 N.D. +0.3 -0.1
pH R2A_PIPES pH 4.25 +0.0 +0.5 N.D. -0.0 +0.7
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