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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS03970 and LRK55_RS03975 overlap by 4 nucleotides
LRK55_RS03975 and LRK55_RS03980 are separated by 52 nucleotides
LRK55_RS03980 and LRK55_RS03985 overlap by 4 nucleotides
LRK55_RS03985 and LRK55_RS03990 are separated by 35 nucleotides
LRK55_RS03970: LRK55_RS03970 - glutathione synthase, at 843,840 to 844,817
_RS03970
LRK55_RS03975: LRK55_RS03975 - energy transducer TonB, at 844,814 to 845,683
_RS03975
LRK55_RS03980: LRK55_RS03980 - YqgE/AlgH family protein, at 845,736 to 846,305
_RS03980
LRK55_RS03985: LRK55_RS03985 - Holliday junction resolvase RuvX, at 846,302 to 846,751
_RS03985
LRK55_RS03990: LRK55_RS03990 - aspartate carbamoyltransferase catalytic subunit, at 846,787 to 847,713
_RS03990
Group
Condition
LRK55
_RS03970
LRK55
_RS03975
LRK55
_RS03980
LRK55
_RS03985
LRK55
_RS03990
pH
R2A_PIPES pH 4.25
N.D.
-0.4
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-0.3
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.2
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-0.1
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.1
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.1
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
N.D.
-0.1
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-0.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.1
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
+0.2
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
+0.2
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.2
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.3
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
+0.3
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
+0.3
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
+0.3
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.4
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.4
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.4
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
+0.5
N.D.
N.D.
N.D.
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