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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS03665 and LRK55_RS03670 are separated by 23 nucleotides
LRK55_RS03670 and LRK55_RS03675 overlap by 1 nucleotides
LRK55_RS03675 and LRK55_RS03680 overlap by 4 nucleotides
LRK55_RS03680 and LRK55_RS03685 are separated by 247 nucleotides
LRK55_RS03665: LRK55_RS03665 - polysaccharide biosynthesis protein, at 774,918 to 776,282
_RS03665
LRK55_RS03670: LRK55_RS03670 - GDP-mannose 4,6-dehydratase, at 776,306 to 777,316
_RS03670
LRK55_RS03675: LRK55_RS03675 - class I SAM-dependent methyltransferase, at 777,316 to 778,578
_RS03675
LRK55_RS03680: LRK55_RS03680 - glycosyltransferase family 2 protein, at 778,575 to 779,603
_RS03680
LRK55_RS03685: LRK55_RS03685 - glycosyltransferase, at 779,851 to 780,882
_RS03685
Group
Condition
LRK55
_RS03665
LRK55
_RS03670
LRK55
_RS03675
LRK55
_RS03680
LRK55
_RS03685
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-4.5
-4.0
-4.2
-4.9
-4.0
pH
R2A_PIPES pH 4.25
-4.0
-3.7
-4.3
-3.8
-4.1
pH
R2A_PIPES pH 4.25
-4.3
-3.9
-3.7
-4.0
-4.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-4.5
-3.2
-3.8
-3.8
-3.7
stress
R2A_PIPES with Cadmium chloride 64 uM
-3.7
-3.2
-3.0
-3.1
-3.1
pH
R2A_PIPES pH 4.5
-4.1
-2.4
-2.5
-2.9
-3.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-3.6
-2.9
-2.7
-2.5
-2.9
pH
R2A_PIPES pH 4.5
-3.9
-2.5
-2.7
-2.5
-2.7
stress
R2A with Zinc chloride 2560 uM
-3.9
-2.1
-2.6
-2.7
-2.9
stress
R2A with Zinc chloride 2560 uM
-3.7
-1.8
-2.7
-2.3
-2.1
stress
R2A with Nickel (II) chloride 1696 uM
-4.0
-1.7
-2.0
-2.0
-2.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-3.2
-1.6
-2.1
-2.2
-2.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-2.9
-1.4
-2.1
-1.8
-2.3
stress
R2A with Nickel (II) chloride 1696 uM
-2.8
-1.6
-1.8
-1.8
-2.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-2.1
-1.0
-1.5
-1.2
-1.6
no stress control
no stress control
-1.6
-1.4
-1.4
-1.3
-1.5
no stress control
no stress control
-2.0
-1.0
-1.4
-1.4
-1.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-2.3
-0.9
-1.4
-1.2
-1.3
no stress control
no stress control
-1.9
-1.1
-1.3
-1.3
-1.5
no stress control
no stress control
-2.0
-0.9
-1.6
-1.0
-1.4
no stress control
no stress control
-1.8
-0.9
-1.1
-1.4
-1.5
no stress control
no stress control
-1.5
-0.9
-1.4
-1.2
-1.5
no stress control
no stress control
-1.3
-1.0
-1.2
-1.3
-1.4
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