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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS03590 and LRK55_RS03595 are separated by 3 nucleotides
LRK55_RS03595 and LRK55_RS03600 are separated by 237 nucleotides
LRK55_RS03600 and LRK55_RS03605 are separated by 124 nucleotides
LRK55_RS03605 and LRK55_RS03610 are separated by 61 nucleotides
LRK55_RS03590: LRK55_RS03590 - hypothetical protein, at 756,638 to 757,018
_RS03590
LRK55_RS03595: LRK55_RS03595 - DUF3106 domain-containing protein, at 757,022 to 757,549
_RS03595
LRK55_RS03600: LRK55_RS03600 - NAD(P) transhydrogenase subunit alpha, at 757,787 to 758,890
_RS03600
LRK55_RS03605: LRK55_RS03605 - cytidine deaminase, at 759,015 to 759,431
_RS03605
LRK55_RS03610: LRK55_RS03610 - nitroreductase, at 759,493 to 760,062
_RS03610
Group
Condition
LRK55
_RS03590
LRK55
_RS03595
LRK55
_RS03600
LRK55
_RS03605
LRK55
_RS03610
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
-0.2
-0.6
-0.1
no stress control
no stress control
N.D.
N.D.
-0.4
+0.0
-0.3
no stress control
no stress control
N.D.
N.D.
-0.2
-0.1
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
-0.1
-0.0
-0.0
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-0.4
-0.1
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
-0.2
+0.3
-0.2
no stress control
no stress control
N.D.
N.D.
-0.2
+0.0
+0.1
no stress control
no stress control
N.D.
N.D.
-0.3
+0.3
-0.0
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-0.1
-0.0
+0.2
no stress control
no stress control
N.D.
N.D.
-0.3
-0.1
+0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-0.0
+0.2
-0.0
no stress control
no stress control
N.D.
N.D.
-0.1
+0.3
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-0.1
+0.2
+0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
+0.2
-0.0
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-0.1
+0.3
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.0
+0.3
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
-0.2
+0.0
+0.6
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-0.2
+0.2
+0.4
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
+0.1
-0.1
+0.5
no stress control
no stress control
N.D.
N.D.
-0.1
+0.4
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.2
+0.5
+0.1
pH
R2A_PIPES pH 4.25
N.D.
N.D.
+0.0
+0.0
+0.8
pH
R2A_PIPES pH 4.5
N.D.
N.D.
+0.1
+0.0
+0.8
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