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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS03485 and LRK55_RS03490 overlap by 4 nucleotides
LRK55_RS03490 and LRK55_RS03495 are separated by 106 nucleotides
LRK55_RS03495 and LRK55_RS03500 overlap by 4 nucleotides
LRK55_RS03500 and LRK55_RS03505 are separated by 161 nucleotides
LRK55_RS03485: LRK55_RS03485 - TlpA disulfide reductase family protein, at 739,325 to 739,810
_RS03485
LRK55_RS03490: LRK55_RS03490 - YihY family inner membrane protein, at 739,807 to 741,084
_RS03490
LRK55_RS03495: LRK55_RS03495 - NAD(P)H:quinone oxidoreductase, at 741,191 to 741,793
_RS03495
LRK55_RS03500: LRK55_RS03500 - DUF2069 domain-containing protein, at 741,790 to 742,164
_RS03500
LRK55_RS03505: LRK55_RS03505 - hypothetical protein, at 742,326 to 743,105
_RS03505
Group
Condition
LRK55
_RS03485
LRK55
_RS03490
LRK55
_RS03495
LRK55
_RS03500
LRK55
_RS03505
pH
R2A_PIPES pH 4.25
+0.4
-0.4
-3.0
-0.9
-0.8
pH
R2A_PIPES pH 4.25
+0.1
-0.4
-2.3
-0.7
-0.5
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.1
-1.9
-0.7
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.0
-1.5
-1.5
-0.2
stress
R2A with Zinc chloride 2560 uM
+0.3
-0.1
-1.6
-0.8
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.2
-0.9
-1.2
-0.3
pH
R2A_PIPES pH 4.5
+0.2
-0.2
-1.3
-0.7
-0.4
pH
R2A_PIPES pH 4.5
+0.6
-0.2
-1.6
-0.9
-0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
+0.0
-2.0
-0.1
-0.5
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.1
-1.5
-0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
-0.0
-1.1
-0.3
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.1
-1.0
-0.4
-0.3
no stress control
no stress control
-0.1
-0.1
-0.9
-0.4
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.2
-1.0
-0.4
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.0
-0.9
-0.5
-0.2
no stress control
no stress control
-0.0
+0.0
-1.2
-0.3
-0.2
no stress control
no stress control
+0.3
-0.1
-1.0
-0.3
-0.4
no stress control
no stress control
+0.1
+0.1
-1.0
-0.4
-0.3
no stress control
no stress control
+0.2
-0.2
-0.9
-0.3
-0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.4
+0.2
-1.8
+0.3
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
-0.1
-1.0
-0.2
-0.2
no stress control
no stress control
-0.0
-0.0
-0.7
-0.3
-0.1
no stress control
no stress control
+0.4
+0.1
-0.4
-0.4
-0.4
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