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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS03410 and LRK55_RS03415 are separated by 137 nucleotides
LRK55_RS03415 and LRK55_RS03420 are separated by 278 nucleotides
LRK55_RS03420 and LRK55_RS03425 are separated by 139 nucleotides
LRK55_RS03425 and LRK55_RS03430 are separated by 81 nucleotides
LRK55_RS03410: LRK55_RS03410 - tRNA-Gly, at 726,836 to 726,909
_RS03410
LRK55_RS03415: LRK55_RS03415 - tRNA-Tyr, at 727,047 to 727,132
_RS03415
LRK55_RS03420: LRK55_RS03420 - acyl-CoA thioesterase, at 727,411 to 727,899
_RS03420
LRK55_RS03425: LRK55_RS03425 - redox-regulated ATPase YchF, at 728,039 to 729,127
_RS03425
LRK55_RS03430: LRK55_RS03430 - aminoacyl-tRNA hydrolase, at 729,209 to 729,790
_RS03430
Group
Condition
LRK55
_RS03410
LRK55
_RS03415
LRK55
_RS03420
LRK55
_RS03425
LRK55
_RS03430
no stress control
no stress control
N.D.
N.D.
+0.1
-3.4
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-0.3
-2.9
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-0.2
-2.9
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
+0.3
-3.4
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
+0.4
-2.9
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
+0.2
-2.6
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
+0.2
-2.4
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
-0.2
-2.0
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
+0.2
-2.2
N.D.
no stress control
no stress control
N.D.
N.D.
+0.2
-2.0
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.3
-2.0
N.D.
no stress control
no stress control
N.D.
N.D.
+0.4
-2.0
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-0.2
-1.4
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
+0.2
-1.7
N.D.
no stress control
no stress control
N.D.
N.D.
+0.2
-1.6
N.D.
no stress control
no stress control
N.D.
N.D.
-0.1
-1.3
N.D.
no stress control
no stress control
N.D.
N.D.
+0.4
-1.8
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
+0.1
-1.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.3
-1.4
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
+0.0
-1.1
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-0.1
-0.9
N.D.
no stress control
no stress control
N.D.
N.D.
+0.3
-1.2
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
+0.1
+0.1
N.D.
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