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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02945 and LRK55_RS02950 overlap by 20 nucleotides
LRK55_RS02950 and LRK55_RS02955 are separated by 1 nucleotides
LRK55_RS02955 and LRK55_RS02960 are separated by 22 nucleotides
LRK55_RS02960 and LRK55_RS02965 are separated by 97 nucleotides
LRK55_RS02945: LRK55_RS02945 - MerR family transcriptional regulator, at 636,088 to 636,444
_RS02945
LRK55_RS02950: LRK55_RS02950 - integration host factor subunit alpha, at 636,425 to 636,724
_RS02950
LRK55_RS02955: LRK55_RS02955 - phenylalanine--tRNA ligase subunit beta, at 636,726 to 639,104
_RS02955
LRK55_RS02960: LRK55_RS02960 - phenylalanine--tRNA ligase subunit alpha, at 639,127 to 640,122
_RS02960
LRK55_RS02965: LRK55_RS02965 - 50S ribosomal protein L20, at 640,220 to 640,579
_RS02965
Group
Condition
LRK55
_RS02945
LRK55
_RS02950
LRK55
_RS02955
LRK55
_RS02960
LRK55
_RS02965
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-4.5
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-4.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-3.9
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-3.7
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-3.4
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
-3.2
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
-3.1
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-3.1
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
N.D.
-2.7
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
N.D.
-2.5
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-2.5
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-2.5
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-2.5
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-2.4
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-2.3
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
N.D.
-2.3
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-1.9
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
-1.9
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-1.8
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-1.7
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-1.1
N.D.
N.D.
N.D.
no stress control
no stress control
N.D.
-0.9
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.7
N.D.
N.D.
N.D.
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