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Cofit
Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02915 and LRK55_RS02920 are separated by 123 nucleotides
LRK55_RS02920 and LRK55_RS02925 are separated by 37 nucleotides
LRK55_RS02925 and LRK55_RS02930 are separated by 61 nucleotides
LRK55_RS02930 and LRK55_RS02935 are separated by 115 nucleotides
LRK55_RS02915: LRK55_RS02915 - PsiF family protein, at 630,871 to 631,263
_RS02915
LRK55_RS02920: LRK55_RS02920 - uracil phosphoribosyltransferase, at 631,387 to 632,031
_RS02920
LRK55_RS02925: LRK55_RS02925 - prolyl aminopeptidase, at 632,069 to 633,028
_RS02925
LRK55_RS02930: LRK55_RS02930 - FAD-binding oxidoreductase, at 633,090 to 634,481
_RS02930
LRK55_RS02935: LRK55_RS02935 - phosphoglycerate dehydrogenase, at 634,597 to 635,829
_RS02935
Group
Condition
LRK55
_RS02915
LRK55
_RS02920
LRK55
_RS02925
LRK55
_RS02930
LRK55
_RS02935
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
+0.3
+0.1
-0.3
-1.3
stress
R2A with Zinc chloride 2560 uM
+0.1
+0.0
+0.2
-0.7
-1.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.9
+0.3
+0.1
+0.1
-1.0
no stress control
no stress control
+0.1
+0.0
+0.0
-0.4
-1.1
pH
R2A_PIPES pH 4.25
+0.0
+0.1
+0.2
+0.2
-1.9
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
+0.1
+0.1
-0.2
-1.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.1
+0.1
-0.2
-1.2
no stress control
no stress control
+0.1
+0.0
+0.2
-0.1
-1.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.1
+0.2
-0.0
-1.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
+0.2
+0.1
+0.3
-1.1
no stress control
no stress control
+0.4
+0.2
+0.1
+0.2
-1.5
stress
R2A with Zinc chloride 2560 uM
+0.4
+0.0
+0.2
-0.4
-0.8
pH
R2A_PIPES pH 4.5
+0.1
+0.1
+0.1
-0.1
-0.8
no stress control
no stress control
+0.5
+0.0
+0.1
-0.3
-0.9
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
+0.0
-0.2
+0.0
-0.7
no stress control
no stress control
+0.1
-0.0
+0.1
-0.2
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.2
+0.2
-0.2
-0.5
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.0
+0.2
-0.2
-0.6
no stress control
no stress control
+0.4
-0.0
+0.1
-0.3
-0.5
pH
R2A_PIPES pH 4.5
+0.3
+0.1
+0.3
-0.1
-0.7
no stress control
no stress control
+0.4
+0.0
+0.0
-0.2
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.2
+0.2
+0.2
-0.4
pH
R2A_PIPES pH 4.25
+1.1
+0.2
-0.1
-0.1
-0.8
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