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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02875 and LRK55_RS02880 are separated by 159 nucleotides
LRK55_RS02880 and LRK55_RS02885 are separated by 96 nucleotides
LRK55_RS02885 and LRK55_RS02890 are separated by 66 nucleotides
LRK55_RS02890 and LRK55_RS02895 are separated by 75 nucleotides
LRK55_RS02875: LRK55_RS02875 - preprotein translocase subunit YajC, at 622,440 to 622,772
_RS02875
LRK55_RS02880: LRK55_RS02880 - tRNA guanosine(34) transglycosylase Tgt, at 622,932 to 624,059
_RS02880
LRK55_RS02885: LRK55_RS02885 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 624,156 to 625,187
_RS02885
LRK55_RS02890: LRK55_RS02890 - response regulator transcription factor, at 625,254 to 625,856
_RS02890
LRK55_RS02895: LRK55_RS02895 - sensor histidine kinase, at 625,932 to 627,161
_RS02895
Group
Condition
LRK55
_RS02875
LRK55
_RS02880
LRK55
_RS02885
LRK55
_RS02890
LRK55
_RS02895
pH
R2A_PIPES pH 4.25
N.D.
-1.4
-0.1
-0.4
-0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-1.2
-0.5
-0.1
-0.3
no stress control
no stress control
N.D.
-0.8
-0.5
-0.1
-0.5
no stress control
no stress control
N.D.
-1.0
-0.5
-0.1
-0.1
no stress control
no stress control
N.D.
-0.9
-0.4
+0.1
-0.2
no stress control
no stress control
N.D.
-0.7
-0.5
+0.2
-0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.6
-0.3
+0.0
-0.3
pH
R2A_PIPES pH 4.5
N.D.
-0.7
-0.3
-0.2
-0.0
no stress control
no stress control
N.D.
-0.6
-0.5
+0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.5
-0.5
+0.1
-0.2
pH
R2A_PIPES pH 4.5
N.D.
-0.6
-0.3
-0.2
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.4
-0.2
-0.3
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.6
-0.4
+0.0
-0.0
no stress control
no stress control
N.D.
-0.5
-0.2
-0.1
-0.2
pH
R2A_PIPES pH 4.25
N.D.
-0.8
+0.1
+0.3
-0.6
no stress control
no stress control
N.D.
-0.5
-0.2
-0.2
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.5
-0.2
-0.0
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.7
+0.0
-0.0
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.3
-0.1
-0.1
+0.0
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.2
+0.1
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.4
-0.3
+0.3
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.4
-0.0
+0.1
+0.0
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.3
+0.4
+0.1
+0.3
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