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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02540 and LRK55_RS02545 overlap by 4 nucleotides
LRK55_RS02545 and LRK55_RS02550 overlap by 8 nucleotides
LRK55_RS02550 and LRK55_RS02555 overlap by 4 nucleotides
LRK55_RS02555 and LRK55_RS02560 are separated by 124 nucleotides
LRK55_RS02540: LRK55_RS02540 - PqiC family protein, at 546,372 to 547,031
_RS02540
LRK55_RS02545: LRK55_RS02545 - MlaD family protein, at 547,028 to 548,725
_RS02545
LRK55_RS02550: LRK55_RS02550 - paraquat-inducible protein A, at 548,718 to 549,371
_RS02550
LRK55_RS02555: LRK55_RS02555 - paraquat-inducible protein A, at 549,368 to 549,985
_RS02555
LRK55_RS02560: LRK55_RS02560 - thioredoxin, at 550,110 to 550,976
_RS02560
Group
Condition
LRK55
_RS02540
LRK55
_RS02545
LRK55
_RS02550
LRK55
_RS02555
LRK55
_RS02560
pH
R2A_PIPES pH 4.25
-2.4
-2.8
-3.0
-2.4
-2.6
pH
R2A_PIPES pH 4.25
-2.3
-2.6
-2.1
-2.8
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.7
-0.9
-0.9
-1.0
-2.1
stress
R2A with Zinc chloride 2560 uM
-0.7
-1.0
-0.8
-0.9
-2.1
pH
R2A_PIPES pH 4.5
-0.7
-0.9
-0.6
-0.7
-0.7
stress
R2A with Nickel (II) chloride 1696 uM
-0.7
-0.5
-0.5
-0.5
-0.4
pH
R2A_PIPES pH 4.5
-0.6
-0.6
-0.8
-0.7
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.5
-0.4
-0.5
-0.6
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.6
-0.8
-0.6
-0.4
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.3
-0.2
-0.5
-0.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-0.7
-0.4
-0.4
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.4
-0.3
-0.4
-0.6
no stress control
no stress control
-0.2
-0.2
-0.5
-0.2
-0.7
no stress control
no stress control
-0.1
-0.3
-0.6
-0.2
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
-0.3
-0.5
-0.5
+0.2
no stress control
no stress control
-0.4
-0.3
-0.4
-0.2
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-0.4
-0.4
-0.2
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.5
-0.5
-0.5
+0.5
no stress control
no stress control
-0.2
-0.2
-0.2
-0.4
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
-0.6
-0.7
-0.7
+1.5
no stress control
no stress control
-0.0
-0.4
-0.4
-0.2
+0.1
no stress control
no stress control
-0.2
-0.4
-0.2
-0.5
+0.5
no stress control
no stress control
-0.2
-0.5
-0.7
-0.4
+1.0
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