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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02330 and LRK55_RS02335 are separated by 30 nucleotides
LRK55_RS02335 and LRK55_RS02340 overlap by 4 nucleotides
LRK55_RS02340 and LRK55_RS02345 are separated by 84 nucleotides
LRK55_RS02345 and LRK55_RS02350 are separated by 188 nucleotides
LRK55_RS02330: LRK55_RS02330 - aldehyde dehydrogenase, at 504,909 to 506,396
_RS02330
LRK55_RS02335: LRK55_RS02335 - carbonate dehydratase, at 506,427 to 507,092
_RS02335
LRK55_RS02340: LRK55_RS02340 - Rid family hydrolase, at 507,089 to 507,520
_RS02340
LRK55_RS02345: LRK55_RS02345 - hypothetical protein, at 507,605 to 507,862
_RS02345
LRK55_RS02350: LRK55_RS02350 - N-formylglutamate deformylase, at 508,051 to 508,830
_RS02350
Group
Condition
LRK55
_RS02330
LRK55
_RS02335
LRK55
_RS02340
LRK55
_RS02345
LRK55
_RS02350
pH
R2A_PIPES pH 4.25
-0.8
N.D.
-0.1
N.D.
-0.3
pH
R2A_PIPES pH 4.25
-0.5
N.D.
-0.1
N.D.
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.1
N.D.
-0.5
N.D.
+0.1
pH
R2A_PIPES pH 4.5
-0.1
N.D.
-0.3
N.D.
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
N.D.
-0.1
N.D.
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
N.D.
-0.4
N.D.
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
N.D.
-0.3
N.D.
+0.1
pH
R2A_PIPES pH 4.5
-0.0
N.D.
-0.3
N.D.
+0.2
no stress control
no stress control
-0.2
N.D.
+0.0
N.D.
+0.2
no stress control
no stress control
+0.0
N.D.
-0.1
N.D.
+0.2
no stress control
no stress control
-0.1
N.D.
+0.1
N.D.
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
N.D.
+0.1
N.D.
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
N.D.
-0.1
N.D.
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
N.D.
-0.1
N.D.
+0.3
stress
R2A with Zinc chloride 2560 uM
+0.1
N.D.
-0.1
N.D.
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
N.D.
-0.1
N.D.
+0.3
no stress control
no stress control
+0.0
N.D.
+0.1
N.D.
+0.1
no stress control
no stress control
-0.1
N.D.
+0.2
N.D.
+0.1
no stress control
no stress control
+0.2
N.D.
-0.1
N.D.
+0.1
no stress control
no stress control
-0.1
N.D.
+0.2
N.D.
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
N.D.
+0.3
N.D.
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
N.D.
+0.3
N.D.
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
N.D.
-0.2
N.D.
+0.4
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