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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02315 and LRK55_RS02320 overlap by 4 nucleotides
LRK55_RS02320 and LRK55_RS02325 are separated by 14 nucleotides
LRK55_RS02325 and LRK55_RS02330 are separated by 87 nucleotides
LRK55_RS02330 and LRK55_RS02335 are separated by 30 nucleotides
LRK55_RS02315: LRK55_RS02315 - MalM family protein, at 502,871 to 503,698
_RS02315
LRK55_RS02320: LRK55_RS02320 - hypothetical protein, at 503,695 to 504,015
_RS02320
LRK55_RS02325: LRK55_RS02325 - SDR family oxidoreductase, at 504,030 to 504,821
_RS02325
LRK55_RS02330: LRK55_RS02330 - aldehyde dehydrogenase, at 504,909 to 506,396
_RS02330
LRK55_RS02335: LRK55_RS02335 - carbonate dehydratase, at 506,427 to 507,092
_RS02335
Group
Condition
LRK55
_RS02315
LRK55
_RS02320
LRK55
_RS02325
LRK55
_RS02330
LRK55
_RS02335
pH
R2A_PIPES pH 4.25
-3.3
+0.2
+0.0
-0.8
N.D.
pH
R2A_PIPES pH 4.25
-3.0
+0.3
-0.2
-0.5
N.D.
pH
R2A_PIPES pH 4.5
-1.9
+0.3
-0.5
-0.0
N.D.
pH
R2A_PIPES pH 4.5
-1.6
+0.3
-0.6
-0.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.4
+0.1
+0.0
-0.1
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
-0.0
-0.5
-0.1
N.D.
no stress control
no stress control
-0.7
-0.0
-0.0
-0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.1
+0.1
+0.0
+0.0
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
+0.0
-0.8
+0.2
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.9
+0.1
+0.0
-0.1
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
+0.0
-0.4
+0.0
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.9
+0.2
-0.0
+0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.5
-0.0
-0.1
+0.1
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
+0.2
-0.6
+0.1
N.D.
no stress control
no stress control
-0.4
+0.2
-0.3
-0.1
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.0
+0.2
-0.7
-0.1
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.4
+0.2
-0.5
+0.1
N.D.
no stress control
no stress control
-0.5
+0.2
-0.2
-0.1
N.D.
no stress control
no stress control
-0.4
+0.1
-0.1
-0.1
N.D.
no stress control
no stress control
-0.4
+0.0
-0.1
+0.0
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
+0.2
-0.3
+0.0
N.D.
no stress control
no stress control
-0.4
-0.1
-0.1
+0.2
N.D.
no stress control
no stress control
-0.3
+0.1
-0.0
+0.0
N.D.
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