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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02300 and LRK55_RS02305 are separated by 282 nucleotides
LRK55_RS02305 and LRK55_RS02310 are separated by 151 nucleotides
LRK55_RS02310 and LRK55_RS02315 are separated by 14 nucleotides
LRK55_RS02315 and LRK55_RS02320 overlap by 4 nucleotides
LRK55_RS02300: LRK55_RS02300 - 30S ribosomal protein S6, at 500,258 to 500,680
_RS02300
LRK55_RS02305: LRK55_RS02305 - iron-sulfur cluster assembly accessory protein, at 500,963 to 501,289
_RS02305
LRK55_RS02310: LRK55_RS02310 - asparagine--tRNA ligase, at 501,441 to 502,856
_RS02310
LRK55_RS02315: LRK55_RS02315 - MalM family protein, at 502,871 to 503,698
_RS02315
LRK55_RS02320: LRK55_RS02320 - hypothetical protein, at 503,695 to 504,015
_RS02320
Group
Condition
LRK55
_RS02300
LRK55
_RS02305
LRK55
_RS02310
LRK55
_RS02315
LRK55
_RS02320
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-3.3
+0.2
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-3.0
+0.3
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-1.9
+0.3
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-1.6
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-1.4
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-1.1
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-0.9
+0.1
no stress control
no stress control
N.D.
N.D.
N.D.
-0.7
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-0.9
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-0.5
-0.0
no stress control
no stress control
N.D.
N.D.
N.D.
-0.4
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
-0.4
-0.0
no stress control
no stress control
N.D.
N.D.
N.D.
-0.4
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
-0.4
+0.0
no stress control
no stress control
N.D.
N.D.
N.D.
-0.4
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
-0.3
+0.0
no stress control
no stress control
N.D.
N.D.
N.D.
-0.5
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
-0.4
+0.2
no stress control
no stress control
N.D.
N.D.
N.D.
-0.3
+0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
-0.4
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-0.4
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
-0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
-0.0
+0.2
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