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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02200 and LRK55_RS02205 are separated by 120 nucleotides
LRK55_RS02205 and LRK55_RS02210 are separated by 109 nucleotides
LRK55_RS02210 and LRK55_RS02215 overlap by 4 nucleotides
LRK55_RS02215 and LRK55_RS02220 overlap by 4 nucleotides
LRK55_RS02200: LRK55_RS02200 - membrane protein insertion efficiency factor YidD, at 482,242 to 482,484
_RS02200
LRK55_RS02205: LRK55_RS02205 - GTP cyclohydrolase FolE2, at 482,605 to 483,552
_RS02205
LRK55_RS02210: LRK55_RS02210 - squalene/phytoene synthase family protein, at 483,662 to 484,516
_RS02210
LRK55_RS02215: LRK55_RS02215 - phosphoglycolate phosphatase, at 484,513 to 485,193
_RS02215
LRK55_RS02220: LRK55_RS02220 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 485,190 to 485,894
_RS02220
Group
Condition
LRK55
_RS02200
LRK55
_RS02205
LRK55
_RS02210
LRK55
_RS02215
LRK55
_RS02220
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-2.4
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-1.9
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
-1.8
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
-1.8
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-1.7
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-1.5
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-1.5
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
-1.4
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-1.4
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-1.4
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-1.3
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
-1.3
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-1.1
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-1.1
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-1.1
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-1.0
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-1.0
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
-0.8
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
-0.8
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-0.6
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
+0.5
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
+1.1
N.D.
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