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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02175 and LRK55_RS02180 are separated by 190 nucleotides
LRK55_RS02180 and LRK55_RS02185 are separated by 119 nucleotides
LRK55_RS02185 and LRK55_RS02190 are separated by 304 nucleotides
LRK55_RS02190 and LRK55_RS02195 are separated by 110 nucleotides
LRK55_RS02175: LRK55_RS02175 - glycine zipper 2TM domain-containing protein, at 475,680 to 476,207
_RS02175
LRK55_RS02180: LRK55_RS02180 - cysteine--tRNA ligase, at 476,398 to 477,768
_RS02180
LRK55_RS02185: LRK55_RS02185 - SufE family protein, at 477,888 to 478,322
_RS02185
LRK55_RS02190: LRK55_RS02190 - TonB-dependent siderophore receptor, at 478,627 to 480,726
_RS02190
LRK55_RS02195: LRK55_RS02195 - RNA polymerase-binding protein DksA, at 480,837 to 482,096
_RS02195
Group
Condition
LRK55
_RS02175
LRK55
_RS02180
LRK55
_RS02185
LRK55
_RS02190
LRK55
_RS02195
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-4.8
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-4.4
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-4.2
N.D.
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-4.1
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
-4.1
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
-4.0
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
-3.0
N.D.
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
-2.8
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-1.7
N.D.
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-1.7
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-0.9
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-0.9
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-0.8
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-0.6
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.2
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.1
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.1
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
-0.1
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.1
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.1
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.0
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
-0.0
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
+0.0
N.D.
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