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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02135 and LRK55_RS02140 are separated by 19 nucleotides
LRK55_RS02140 and LRK55_RS02145 are separated by 3 nucleotides
LRK55_RS02145 and LRK55_RS02150 are separated by 17 nucleotides
LRK55_RS02150 and LRK55_RS02155 overlap by 4 nucleotides
LRK55_RS02135: LRK55_RS02135 - argininosuccinate lyase, at 467,250 to 468,545
_RS02135
LRK55_RS02140: LRK55_RS02140 - N-acetyl-gamma-glutamyl-phosphate reductase, at 468,565 to 469,518
_RS02140
LRK55_RS02145: LRK55_RS02145 - acetylglutamate kinase, at 469,522 to 470,841
_RS02145
LRK55_RS02150: LRK55_RS02150 - acetylornithine deacetylase, at 470,859 to 471,992
_RS02150
LRK55_RS02155: LRK55_RS02155 - argininosuccinate synthase, at 471,989 to 473,182
_RS02155
Group
Condition
LRK55
_RS02135
LRK55
_RS02140
LRK55
_RS02145
LRK55
_RS02150
LRK55
_RS02155
stress
R2A_PIPES with Cadmium chloride 64 uM
-3.1
-1.3
-0.4
-2.6
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.6
-0.2
-1.0
-2.7
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.1
-0.9
-1.4
-1.5
-1.1
pH
R2A_PIPES pH 4.25
-0.7
-0.6
-1.2
-1.4
-1.8
no stress control
no stress control
-1.7
-1.5
-0.7
-0.6
-0.7
no stress control
no stress control
-1.1
-0.6
-1.2
-1.2
-1.0
stress
R2A with Nickel (II) chloride 1696 uM
-1.3
-0.9
-1.0
-1.1
-0.8
pH
R2A_PIPES pH 4.25
-2.4
-0.1
-0.5
-1.4
-0.6
stress
R2A with Nickel (II) chloride 1696 uM
-1.4
-0.8
-1.1
-0.9
-0.6
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-1.5
-0.9
-0.9
-1.1
-0.5
pH
R2A_PIPES pH 4.5
-1.8
-0.8
-0.7
-0.8
-0.7
stress
R2A with Zinc chloride 2560 uM
-1.3
-1.1
-1.1
-0.6
-0.2
pH
R2A_PIPES pH 4.5
-1.3
-0.5
-0.8
-1.3
-0.5
no stress control
no stress control
-0.9
-0.7
-1.4
-0.5
-0.7
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.7
-0.8
-1.0
-1.0
-0.5
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.3
-0.6
-0.9
-0.6
-0.5
no stress control
no stress control
-0.9
-0.7
-0.6
-1.1
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.4
-0.5
-0.9
-0.4
-0.6
no stress control
no stress control
-1.2
-0.4
-1.0
-0.4
-0.8
no stress control
no stress control
-1.1
-0.5
-0.7
-0.6
-0.5
no stress control
no stress control
-1.1
-0.3
-0.6
-0.7
-0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
-0.2
-0.9
-0.6
-0.8
stress
R2A with Zinc chloride 2560 uM
-0.7
-0.5
-0.9
+0.2
-0.8
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